Gene Hhal_0772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0772 
Symbol 
ID4710666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand+ 
Start bp858168 
End bp858806 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content66% 
IMG OID639855233 
Productpeptidase C26 
Protein accessionYP_001002352 
Protein GI121997565 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCGCA GGGTTGCCGT CAGCCAGCGC TGCGATGCCG TGCCCGGGCG TGACGAGGTG 
CGCGACACCC TCGACGTGCG TTTGGCGACG CTGCTCTGGG ATTTGGGGTT TCTGCCGGTT 
CCCATGGCCA GCCACATCAC CGATCGTGCT GCCTACTTTG AGGCCGTTGA GCCCGAGGCC 
GTGGTCCTTA GCGGCGGGAA CAACATTGGC GAGGCCCCCG AGCGCGATCA CTTAGAGATG 
GCCCTGCTTG ATCACGCGGC CGCTTTTAGG CTGCCCGTAG TTGGGATCTG TCGCGGCATG 
CAGATGATGA ACCACTACCA GGGTGGCGCC CTGCGGGCGG TCGCCAGGCA TGTCGCGGTG 
CGCCACCGGG TCAGCGGCCC GCTGGCAGGG GCAGACCGCC GAGTGGTGAA CAGCTACCAC 
GACCAGGGCA TGCTCGACGC CGACCTCGGT GACGACCTTG AGGCCATGGC CTGGTCCGAG 
GACGGCGCAG TGGAAGCGCT GCGCCACCGG GAGTGGCCGT GGCTCGGGAT CATGTGGCAC 
CCGGAGCGCG ACGCGCCCGT CGCTGAGTCT AACCGAAAGC TAATTCGAAA CCACCTGGAA 
GGCCTACCTT TGGACCTTTC CCACGGAGAG ACCTCATGA
 
Protein sequence
MRRRVAVSQR CDAVPGRDEV RDTLDVRLAT LLWDLGFLPV PMASHITDRA AYFEAVEPEA 
VVLSGGNNIG EAPERDHLEM ALLDHAAAFR LPVVGICRGM QMMNHYQGGA LRAVARHVAV 
RHRVSGPLAG ADRRVVNSYH DQGMLDADLG DDLEAMAWSE DGAVEALRHR EWPWLGIMWH 
PERDAPVAES NRKLIRNHLE GLPLDLSHGE TS