| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0690 |
|---|
| Symbol | |
|---|
| ID | 4710523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 771745 |
|---|
| End bp | 773295 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639855153 |
|---|
| Product | 2-isopropylmalate synthase |
|---|
| Protein accession | YP_001002274 |
|---|
| Protein GI | 121997487 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGCAA GCGACCATCT CTACATCTTC GATACCACGC TGCGCGACGG GGAGCAGAGC
CCCGGCGCCT CCATGACCCG CGAGGAGAAG GTGCGCATCG CCAAGGGGCT CGAGCGCATG
CGCGTCGACG TCCTCGAGGC CGGCTTCCCG GCGGCGAGCA CGGGCGACTT CGAGAGCGTC
CGCGCCGTCG CCGAGGCCAT CAAGGAGAGC CGGGTCTGCG CCCTGGCGCG GGCGCGGGAT
CCGGATATCC ACGCCGCCGG CGAGGCCCTG GCCCAGGCCG AGGCCGGGCG CATCCACACC
TTCATCGCCA CCTCGCCGAT CCACATGCAG AACAAGCTGC ACATGACACC GGATCAGGTG
GTGGATGCGG CGGTGCATGC GGTGAGTCTG GCGCGGCAGC TCTGCGACGA CGTGGAGTTC
TCGCCGGAGG ACGCCGGGCG CTCCGAGCAC GACTTCCTCT GCCGGATCAT CGAGGCGGCC
ATCGACGCCG GGGCGCGGAC CATCAACATC CCGGATACGG TGGGCTACAA CCTGCCGGAG
CAGTTCGGTG GGCTGATCCG CACCCTGCGC GAGCGCATCC CCAACTCGGA CAAGGCGGTG
TTCTCGGTGC ACTGCCACAA CGACCTGGGC GTGGCGGTGG CCAACTCCCT GGCCGCGGTC
CAGGCCGGGG CGCGGCAGGT GGAGTGCACC ATCAACGGCC TAGGCGAGCG GGCCGGTAAC
GCCGCCCTCG AGGAGGTGGT CATGGCGGTG AAGACCCGCC AGGACGTCTT CTCCTGCTCG
ACGCGGATCA ACGCCCGCGA GATCGTGCCC ACCTCCAAGC TGGTGGCCAA CATCACCGGC
TTCCACGTCC AGCCGAACAA GGCCATCGTC GGCGTCAACG CCTTCGCCCA CGAGTCGGGC
ATCCACCAGG ACGGGGTGCT CAAGCACCGC GAGACCTACG AGATCATGCG CGCCGAGGAC
GTCGGCTGGC ACACCAACCG CATGGTCCTG GGCAAGCACT CCGGGCGGAA CGCCTTCCGC
TCGCGGCTCG AGGAGCTGGA TATCCACCTC GACTCCGAGG AGCAGCTCAA CGAGGCCTTC
GCCCGCTTCA AGACCCTGGC CGACAAGAAG CACGAGATCT TCGACGAGGA CCTGCAGGCG
CTGGTCACCG AGGCCGGTGC GGCGCTGGAG AACGAGCGCA TCCGGCTGCT CGCGCTGCAC
GTCTGCTCGG AGACCGGGGA GCAGCCGGAG GCCACCGTGT CGCTGCTGAT CGACGGCGAG
GAACGTCAGG CGGTGGCCCC GGGCAGCGGC GCGGTGGATG CGGCGTTCAT GGCGGTGGAC
TCGCTGGTGC AGTCGGGCAC CGAGCTGTTG CTCTACTCGG TGAACAACAT CACCTCCGGG
ACCGACTCCC AGGGCGAGGT CACCGTGCGT CTGGAGCGCG GCGGCCGGGT GGCCAACGGG
CAGGGCGCCG ATGTGGACAT CGTCATCGCC TCGGCGAAGG CGTATATCAA CGCCCTGAAC
AAGATCCTCG CCTCGCCGGA TCGGCGCCAC CCGCAGGCCG GAGACGTCTA A
|
|---|
| Protein sequence | MGASDHLYIF DTTLRDGEQS PGASMTREEK VRIAKGLERM RVDVLEAGFP AASTGDFESV
RAVAEAIKES RVCALARARD PDIHAAGEAL AQAEAGRIHT FIATSPIHMQ NKLHMTPDQV
VDAAVHAVSL ARQLCDDVEF SPEDAGRSEH DFLCRIIEAA IDAGARTINI PDTVGYNLPE
QFGGLIRTLR ERIPNSDKAV FSVHCHNDLG VAVANSLAAV QAGARQVECT INGLGERAGN
AALEEVVMAV KTRQDVFSCS TRINAREIVP TSKLVANITG FHVQPNKAIV GVNAFAHESG
IHQDGVLKHR ETYEIMRAED VGWHTNRMVL GKHSGRNAFR SRLEELDIHL DSEEQLNEAF
ARFKTLADKK HEIFDEDLQA LVTEAGAALE NERIRLLALH VCSETGEQPE ATVSLLIDGE
ERQAVAPGSG AVDAAFMAVD SLVQSGTELL LYSVNNITSG TDSQGEVTVR LERGGRVANG
QGADVDIVIA SAKAYINALN KILASPDRRH PQAGDV
|
|---|
| |