| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0689 |
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| Symbol | |
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| ID | 4710522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 770857 |
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| End bp | 771741 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 639855152 |
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| Product | phage SPO1 DNA polymerase-related protein |
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| Protein accession | YP_001002273 |
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| Protein GI | 121997486 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.614175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATACCC GGCGGCTCAG CTACCTGCGC CAACTGGGGG TGGACTGCTA CATCCCCCGC
GACGCCGCCG TGCTGGAGCC GGCGGCGCCC CGGCAGGCGC CCTCCGCCGA TGCCGCCGGG
GCCGTCTCGA CGCCGCCTGG GCCTGCGGCG CCCGCCGGTC CCCGGCAGGA GCCGGTAGCC
CCGGGGGCGG GGGCCCAGAC CGGGTCGGGG CGCGCCGGGA TGGAGGCCGG ATCGGCGGGC
GGTGCGGAGC CGGCGTCGGC GCCGACGACG GCCCCGGAAC CGGGCGGGGC CCCGCAAGCG
GCGGCCCCGG AGGCGGGCTG CGAGGACCTG GACTGGGACG CCCTCGAGGC CCGGGTGGCC
GGCTGTCACG CCTGCAAGCT CTGCGAGGGG CGGACCCAGA CGGTCTTCGG CGTCGGCGAC
CGGCAGGCGG ATCTGGTGAT CATCGGCGAG GGCCCGGGGG CCGAGGAAGA CCGCCAGGGC
GAACCCTTCG TCGGGCGGGC CGGGCAACTG CTCGACGCCA TGCTCGCCGC CATCGATCGT
GGCCGCGACC GCGGCGGGGT CTACATCGGC AACATCGTCA AGTGCCGCCC CCCCGGCAAC
CGGGACCCGC GGCCCGACGA GGTCGCCGCC TGCACACCGT ATCTGCGCCG GCAGCTCGAG
CTCCTCGAGC CGAAGGCGAT CGTTGCCCTG GGGCGGGTGG CGGCACAGCA GCTGCTGGAG
ACCAAGTCGC CGCTGGCCAA GCTGCGCGGG CGCGTCCACC ACTACGGGGC GCAGTCGATC
CCGGTCTGGG TGACCTACCA CCCGGCCTAC CTTTTGCGCT CGCCCGGCGA GAAGGCCAAG
GTGTGGCAGG ATCTCAAGCG GATCCGCGGG CTGGTCGAGG AATGA
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| Protein sequence | MDTRRLSYLR QLGVDCYIPR DAAVLEPAAP RQAPSADAAG AVSTPPGPAA PAGPRQEPVA
PGAGAQTGSG RAGMEAGSAG GAEPASAPTT APEPGGAPQA AAPEAGCEDL DWDALEARVA
GCHACKLCEG RTQTVFGVGD RQADLVIIGE GPGAEEDRQG EPFVGRAGQL LDAMLAAIDR
GRDRGGVYIG NIVKCRPPGN RDPRPDEVAA CTPYLRRQLE LLEPKAIVAL GRVAAQQLLE
TKSPLAKLRG RVHHYGAQSI PVWVTYHPAY LLRSPGEKAK VWQDLKRIRG LVEE
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