Gene Hhal_0598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0598 
Symbol 
ID4710861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp674879 
End bp675670 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content67% 
IMG OID639855056 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001002186 
Protein GI121997399 
COG category[I] Lipid transport and metabolism 
COG ID[COG0623] Enoyl-[acyl-carrier-protein] reductase (NADH) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATTCC TGCAGAACAA GCGCATCCTC GTCGTCGGTG TCGCCAGTGA CCGCTCCATC 
GCCTGGGGCA TCGCCGAGGC GATGCACCAG CAAGGCGCCG AACTCGCCTT CACCTATCAG
AACGAAAAGC TCCAGGACCG GGTGACCAAG CTGGCCGCGT CGGTGGACAG CGAGCTGGTC
TTCCCTTGCG ATGTCAGCTC CGACGAGCAG ATCGAGTCGG TCTTCTCTGA GCTTAGCAAG
CACTGGACCG ATGGCATCGA CGGCATCGTC CACGCCGTGG CCTTCGCACC GCGCGAGGAG
CTCGCCGGCT CGTTCGTGGA CAACACCACG CGCGAGGGCT TCCGAACCTC CCACGAGATC
TCGGCGTACA GCTTCGTGGC CCTGGCGCGC TGCGGGCGGG AGATGCTGCG CCAGCGTCAG
GGGTCGTTGC TCACCCTGAC CTACCTCGGC GGCGAGCGGG CCCTGCCCAA CTACAACGTC
ATGGGTGCGG CGAAGGCCAG CCTGGAGTCG ACCACCCGCT ACATGGCCGC AGATCTGGGT
CCGGAGGGCA TCCGGGTCAA CGCCATCTCG GCCGGGCCGA TCCGGACGCT GGCGGCTTCG
GGGATCGGCA GCTTCAAACA GATGATGAAC TTCAACGAGC AGGCGGCGCC GTTGCGCAAG
AACGTCTCCA CCGAGGAGGT GGGGCACGTG GGCGCGTTCC TCTGCTCGGA CCTGGCTTCG
GGGGTTACCG GCGAGGTGGT GCACGTCGAC GGCGGCTTCC ACTGCGTCGC CCTGTCGGGC
GCGGAGCTCT AA
 
Protein sequence
MGFLQNKRIL VVGVASDRSI AWGIAEAMHQ QGAELAFTYQ NEKLQDRVTK LAASVDSELV 
FPCDVSSDEQ IESVFSELSK HWTDGIDGIV HAVAFAPREE LAGSFVDNTT REGFRTSHEI
SAYSFVALAR CGREMLRQRQ GSLLTLTYLG GERALPNYNV MGAAKASLES TTRYMAADLG
PEGIRVNAIS AGPIRTLAAS GIGSFKQMMN FNEQAAPLRK NVSTEEVGHV GAFLCSDLAS
GVTGEVVHVD GGFHCVALSG AEL