Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0571 |
Symbol | |
ID | 4710575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 646287 |
End bp | 648857 |
Gene Length | 2571 bp |
Protein Length | 856 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639855029 |
Product | DNA gyrase, A subunit |
Protein accession | YP_001002159 |
Protein GI | 121997372 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.533459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGGCG TTGCCCGCGA GATCCTCCCT GTAAACCTCG AAGACGAGAT GCGGCAGTCG TACCTCGATT ACGCCATGAG CGTAATCGTC GGGCGTGCCC TTCCCGATGT CCGCGACGGC CTCAAGCCCG TGCACCGGCG TGTTCTCTAC GCCATGCGCG AGCTGGGCAA CGACTACAAT AAGCCGTACA AGAAGTCGGC GCGTGTGGTC GGTGACGTCA TCGGTAAGTA CCACCCCCAC GGCGACGCCG CGGTCTACGA CACCATTGTG CGCCTGGCCC AGAGCTTTAG CATGCGCTAC CGGCTGGTGG ACGGCCAGGG CAACTTCGGC TCCATCGATG GCGACTCGCC GGCGGCCATG CGGTACACCG AGGTGCGCAT GGCGCGCCTG GCGCACGAGC TGCTGGCCGA TATCGACAAG GAGACGGTGG ACTTCGTCGA CAACTACGAC GGCTCCGAGC AGGAGCCGCA CGTGTTGCCG ACCCGGCTGC CCAACCTGTT GGTCAACGGC GGCTCCGGCA TCGCCGTGGG CATGGCCACC AACATCCCGC CGCACAACCT GCGCGAGGTG ATCGACGCCT GCGTGGCCCT GGTCGACGAC CCGGAACTGC CCGTCGAGTC GCTGATCGAG TATGTGCCGG CGCCGGATCT GCCCACCGGC GGCATCATCT TCGGTACCGC GGGCATCCAT CAGGCCTTCC GCACTGGCCG CGGGCGCATG GTCCTGCGCG CCCGCGCGGA GGTCGAGGAG ATGACCGCCG ACCGCGAGCG CATCGTGGTC ACCGAGCTCC CCTACCAGGT CAACAAGGCG CGGCTGGTCG AGAAGATCGC CGAGCTGGTC AAGGAGCGCC GCCTGGAGGG CATCTCCGAG CTGCGTGACG AATCCGACAA GGAAGGCATC CGCATCGTCC TTGAGCTCAA GCGCGGCGAG GCCGGCGAGA TCGTCCTCAA CAACCTCTAC CGCCACACCC AGATGCAGAC CGTCTTCGGC ATCAACGTGG TGGCACTGCA CGAAGGCCAG CCGCGCACGC TCAACCTCAG GCAGGTGCTC GAGGCCTTCA TCCGCCACCG CCGCGAGGTG GTCACCCGGC GGACCATCTA CGAGCTGCGC AAGGCCCGCG AGCGGGCCCA CGTGCTCGAG GGGCTGGCGG TCGCCCTGGC CAACATCGAC GAGGTCATCG CCCTGATCAA GGGGTCCTCG GGGCCGGCCG AGGCGAAGGC CGAGCTGGTC GCGCGTGAGT GGCGCCCGGG GGTGGTCACC GAGATGCTCG AGCGCGCCGG TGCCGCCGCC ACCCGCCCGG AGGATCTGGC CGATCACTTC GGCCTCGATG CCGACTCCGG CATCTACCGC CTCTCCGAGG CCCAGGCCCA GGCGATCCTC GATCTGCGCC TGCACCGCTT GACGGCCATG GAGCAGGACA AGATCGTCGA GGAGTACAGC AACCTCCTCG AGCGCATCGC CGAACTGATT CACATCCTCG ACAGCGGCGA GCGGCTGATG GAGGTGATCC GCGAGGAGCT GGTGGCCATC CGCGATCAGT ACGGCGACGA GCGCAAGACC GAGATCCGCG AGGACACCGC CGAGCTCTCG CTGGAGGACC TGATCAGCGA GGAGGACATG GTGGTCACGC TCTCCCACCA CGGCTATGTC AAGGCGCAGC CGCTCGACGG CTACCGCGCG CAGCGCCGTG GCGGGCGGGG CAAGAGCGCC ACCGCGATGA AGGACGAGGA CTTCATCGAC AAGCTGTTCA TCGCCAACAC CCACGATACG CTGCTGTGCT TCTCGAGCAC CGGCAAGTGC TACTGGCGCA AGGTCTACGA GCTCCCGCAG GGCAGCCGCA CCTCCCGTGG GCGGCCGATG GTCAACCTGC TGCCGCTCGA AGAGGACGAG CGCATCAACG CCGTGGTCCC CGTTCGCGAG TTCGACGAGG ACCACTTCGT GTTTATGGCC ACGCGCAACG GGACGGTCAA GAAGACGCCC CTGTCGCACT TCTCGCGGCC GCGTTCGAGC GGGATCATCG CCGTGGAGCT GCGCGGCGAC GACACCCTGG TGGATGCCGA GATCACCAAT GGGGATCGCG AGGTGATGCT GCTCTCCGAC GCCGGCAAGG CGCTGCGCTT CCACGAGTCG GACGTGCGGG CCATGGGCCG CACGGCCGGC GGCGTGCGGG GCATCCGCCT GGAGTCCGGG CAGCGGGTGA TCGCGCTGCT GATCCTTGGC GAGGGCGATA TCCTCACCGC CACCGAGCAC GGCTACGGCA AGCGCACCCC GGTGGAGGAC TACCCGCGGC GGGGCCGTGG CGGCATGGGT GTGATCTGCA TCCGGACCAC CGAGCGCAAC GGCCGGGTGG TCGGCGCGGT GCAGGCCGCC GAGGACGACG AGATCATGCT GGTCAGCCGC AGTGGCACGC TGGTCCGCAC GCCGGTGGCC GATGTCTCGC GGGTCGGGCG CAACACCCAG GGGGTCAAGC TCATCAGCCT CGACGAGGCC GAGCAGTTGG TCGGCCTCGA GCGGGTCGAA GGGCTCGCCG AGGGGGAGGC ACCGGAGGCG CCGGATGCGC CCGAGATGTA G
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Protein sequence | MTGVAREILP VNLEDEMRQS YLDYAMSVIV GRALPDVRDG LKPVHRRVLY AMRELGNDYN KPYKKSARVV GDVIGKYHPH GDAAVYDTIV RLAQSFSMRY RLVDGQGNFG SIDGDSPAAM RYTEVRMARL AHELLADIDK ETVDFVDNYD GSEQEPHVLP TRLPNLLVNG GSGIAVGMAT NIPPHNLREV IDACVALVDD PELPVESLIE YVPAPDLPTG GIIFGTAGIH QAFRTGRGRM VLRARAEVEE MTADRERIVV TELPYQVNKA RLVEKIAELV KERRLEGISE LRDESDKEGI RIVLELKRGE AGEIVLNNLY RHTQMQTVFG INVVALHEGQ PRTLNLRQVL EAFIRHRREV VTRRTIYELR KARERAHVLE GLAVALANID EVIALIKGSS GPAEAKAELV AREWRPGVVT EMLERAGAAA TRPEDLADHF GLDADSGIYR LSEAQAQAIL DLRLHRLTAM EQDKIVEEYS NLLERIAELI HILDSGERLM EVIREELVAI RDQYGDERKT EIREDTAELS LEDLISEEDM VVTLSHHGYV KAQPLDGYRA QRRGGRGKSA TAMKDEDFID KLFIANTHDT LLCFSSTGKC YWRKVYELPQ GSRTSRGRPM VNLLPLEEDE RINAVVPVRE FDEDHFVFMA TRNGTVKKTP LSHFSRPRSS GIIAVELRGD DTLVDAEITN GDREVMLLSD AGKALRFHES DVRAMGRTAG GVRGIRLESG QRVIALLILG EGDILTATEH GYGKRTPVED YPRRGRGGMG VICIRTTERN GRVVGAVQAA EDDEIMLVSR SGTLVRTPVA DVSRVGRNTQ GVKLISLDEA EQLVGLERVE GLAEGEAPEA PDAPEM
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