Gene Hhal_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0562 
SymbolihfB 
ID4709542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp636577 
End bp636885 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content65% 
IMG OID639855020 
Productintegration host factor subunit beta 
Protein accessionYP_001002150 
Protein GI121997363 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00988] integration host factor, beta subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.399271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAGT CCGAGCTCAT CGAGGCCATC GCGTCCAAGC AGCCGCATCT GGCGCATAAG 
GACGTCGAGG ACGCTGTCAA AAAGATGCTC GAGCACATGA GCGAGACCCT GGCCAACGGC
AAGCGGATCG AGATCCGTGG CTTCGGGAGC TTCTCCCTGC ACCATCGCCC AGCGCGGATG
GGCCGCAACC CCAAGACCGG GGAACCCGTG GCGCTGCCAG CGAAGTACGT GCCACACTTC
AAGCCGGGTA AAGAGCTGCG GGAGCGCGTG AACAGCAGCC GCCACCAGGC GCCGCTGCGC
TCGCAGTGA
 
Protein sequence
MTKSELIEAI ASKQPHLAHK DVEDAVKKML EHMSETLANG KRIEIRGFGS FSLHHRPARM 
GRNPKTGEPV ALPAKYVPHF KPGKELRERV NSSRHQAPLR SQ