| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0560 |
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| Symbol | |
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| ID | 4709654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 635074 |
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| End bp | 636243 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639855018 |
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| Product | tetratricopeptide repeat protein |
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| Protein accession | YP_001002148 |
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| Protein GI | 121997361 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.143452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGAAC TGTTGTGGCT ACTGCTGCCA GTAGCCGCCC TTTCCGGATG GTGGATCGGC
CGGCGCGGCG GGAGTGACGA GCACCACGAC GCATTCTCTC CTCAGATTTC CGACGCCTAC
TTCCAGGGCC TGAACTACCT GCTCAACGAG GAGCGGGACA AGGCGCTGGA GGTGTTTACC
CGCATGGTCG AGGTCGACAG CGATACCGCT GAGACCCACC TGGCCCTGGG CAGTGTCTTC
CGCCGGCGGG GCGAGGTCGA CCGGGCCATC CGCATCCACC AGAACCTCAT CGCCCGCCCG
TCGCTGACCC GGCGGCAGCG CACCTACGCC CTGCTGGCGC TGGGCGAGGA CTACATGAAG
GCGGGGGTCT TCGACCGGGC CGAGAAGCTC TTCCAGGAGG TGGTGGAGCA GGACGCCCAC
GTAGAGCAGG CCCTGCGCCG GCTGCTGACC ATCTACGAGC ATGAACGCGA ATGGGATCGT
GCCATCGAGA CCGCCGAGCG GCTCGAGCAG GTGGGCGAGG GCGACTACCG TGTGCGGATC
GGCCAGCTGC GCTGCGAGCA GGCCGCCCAT GCCCTGGCGC GGGGCTACAC TGAACACGCG
CGCAAGGCAC TGCGTCGTGC GCTGAGCGCC GATCCCGACT GTGCCCGGGC CAACATGCTG
CTCGGCGACC TGGAGCGCGA ACTGGGACGT TACAAGGCTG CCGTCAAGGC CTACGAGGCC
GTCGGGCAGC AGGACCCGGC GCTGCTGCCG GAGGTCCTTG ATGGCCTGGC CGCCGCCTAC
CGTGGGCTGG GTCGCTCTGG GCAGATGGAG ACCTTCCTGC GGGATACCGT CACCCGCATG
CCCGACGGCC GGCTGATGGT CCGGCTGGCG GAGGTCATTC GCGAGCGCCG CGGTACCCAG
GCGGCGATCC GCGAGCTGAC GCTGATGCTG CGGCGCCAGC CGTCACTGGA CGGTATCCGC
CGGCTGGTGG CCCTGACCCA CTCGGTGGGT GAGCCCATCG GCCCGCGGGA GATGCAGATC
CTGCTGGATC TGTTCGAGAA GCTCGAGGCC GGGCGTGCCC TCTACCGTTG CCGGCGCTGC
GGATTCTCGG CGCGGACGTT GTTCTGGCAG TGCCCGGGTT GCCAGGGCTG GGCGAGCATC
CGGCCGCAGA CCGAGACGGA GGACCGATGA
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| Protein sequence | MHELLWLLLP VAALSGWWIG RRGGSDEHHD AFSPQISDAY FQGLNYLLNE ERDKALEVFT
RMVEVDSDTA ETHLALGSVF RRRGEVDRAI RIHQNLIARP SLTRRQRTYA LLALGEDYMK
AGVFDRAEKL FQEVVEQDAH VEQALRRLLT IYEHEREWDR AIETAERLEQ VGEGDYRVRI
GQLRCEQAAH ALARGYTEHA RKALRRALSA DPDCARANML LGDLERELGR YKAAVKAYEA
VGQQDPALLP EVLDGLAAAY RGLGRSGQME TFLRDTVTRM PDGRLMVRLA EVIRERRGTQ
AAIRELTLML RRQPSLDGIR RLVALTHSVG EPIGPREMQI LLDLFEKLEA GRALYRCRRC
GFSARTLFWQ CPGCQGWASI RPQTETEDR
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