| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0554 |
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| Symbol | |
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| ID | 4709689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 626608 |
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| End bp | 628089 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639855012 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_001002142 |
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| Protein GI | 121997355 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGGCG AACTCGATCT CAACATCCCG CTACTGGCGA CCTTTGTCGT CTACCTGATC
CTGATGATCC TGGTGGGGCT GTTCGCCTAC CGCTTCACCA AGAGCCTCGC CGACTACATC
CTCGGCGGGC GTCGCCTGGG TTCGGGGACG GCGGCCCTCT CGGCCGGCGC CTCGGACATG
AGCGGCTGGC TCCTGCTTGG TCTGCCCGGT GCGGTCTACG CCTCCGGGAT GAACCAGATC
TGGATTGCGG TGGGCCTGAC CATCGGCGCC TACCTCAACT GGCAGTTCAT TGCCGAGCGT
CTGCGTCGCT ACACCGAGGT GGCGCGGGAC TCGATTACCA TCCCGGCCTA CTTCGAGAAT
CGCTTCCGGG ACCAGACCTC GGCGCTGCGC GTGGTCTCGG CCCTGGTGAT CCTGCTGTTC
TTTACCTTCT ACACCTCGGC CGGTCTGGTG GCGGCGGGGA CGCTGTTCGA GGACACCTTC
GGGGTGGAGT ACACCCTGGC GCTGGCGATC GGCGCCTCGG TGATCCTGGT GTACACGCTG
CTGGGCGGTT TCCTGGCGGT TAGCTGGACC GACTTCATCC AGGGCATCCT GATGTTCGTC
GCCCTGATCC TGGTGCCGGT GATCACCGTG ATGAACCTCG GCGGCTGGTC GGAGACCGCC
GGCGCCGTCG GGGAGCTGGA GCCGGGCGCG CTGGACGCCT TCCACGACGT GACCCTGTTC
AGCATCATCT CGCTGATGGC CTGGGGCCTG GGCTACTTCG GGCAGCCCCA CGTGCTGACC
CGTTTCATGG CCATCCGCAG TCCTCGGGAT ATCCCCGCGG CCCGGTTCAT CGGCATGAGC
TGGATGGTCT TCGCCCTGTT CGGCGCCATC TTTACGGGCT TTGCCGGCAT CGCCTTCTTC
GAGGGCACTG GCACCCTGGA CAACCCCGAG ACGGTCTTCA TGGCCCTGAT CCAGGCGCTG
TTCAATCCGT GGGTGGCCGG CTGTCTGCTG GCGGCGGTGC TGGCGGCGAT CATGAGCACC
ATCGACTCCC AGCTGCTGGT CTCCTCCTCG GCCCTGTCCG AGGACTTCTA CAAGCGCTTC
CTGCGTCCGC GGGCCGGTGA CCGGGAGCTG GTCTGGGTCG GTCGCGGTAC GGTGCTCGGC
ATCGGGATCT TCGCCACCCT GCTGGCGCTC AATCCGGATG CCGCGGTCCT CGACCTGGTC
GCTTACGCCT GGGCCGGCTT CGGCGCTGCC TTCGGGCCGG TGATCATCCT CTCGGTCTTC
TGGCGCGGTG CTACGCGCAA CGGGGCCCTG GCGGGGATCA TCGTCGGCGC GGTGACGGTG
GTGGTCTGGG ATCTGCTTGA GGGCGGGCTC TTCGATATGT ACGAGATCCT GCCCGGCTTC
ATCCTGGGTA CCCTGGCGAT CCTGATCTTC AGCCGCGTTG GTGGTCGTCC GAGTGCGGAG
ATCGAGCGGG AGTTCGACAA GGTCGAACAA GGCACCCGCT AA
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| Protein sequence | MNGELDLNIP LLATFVVYLI LMILVGLFAY RFTKSLADYI LGGRRLGSGT AALSAGASDM
SGWLLLGLPG AVYASGMNQI WIAVGLTIGA YLNWQFIAER LRRYTEVARD SITIPAYFEN
RFRDQTSALR VVSALVILLF FTFYTSAGLV AAGTLFEDTF GVEYTLALAI GASVILVYTL
LGGFLAVSWT DFIQGILMFV ALILVPVITV MNLGGWSETA GAVGELEPGA LDAFHDVTLF
SIISLMAWGL GYFGQPHVLT RFMAIRSPRD IPAARFIGMS WMVFALFGAI FTGFAGIAFF
EGTGTLDNPE TVFMALIQAL FNPWVAGCLL AAVLAAIMST IDSQLLVSSS ALSEDFYKRF
LRPRAGDREL VWVGRGTVLG IGIFATLLAL NPDAAVLDLV AYAWAGFGAA FGPVIILSVF
WRGATRNGAL AGIIVGAVTV VVWDLLEGGL FDMYEILPGF ILGTLAILIF SRVGGRPSAE
IEREFDKVEQ GTR
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