Gene Hhal_0515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0515 
Symbol 
ID4710560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp587793 
End bp588578 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content66% 
IMG OID639854973 
Productflagellar basal-body rod protein FlgG 
Protein accessionYP_001002104 
Protein GI121997317 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.308837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCCCG CGCTCTGGGT AGCCAAGACC GGACTCGACG CCCAGCAGAA GAGCATGCAG 
GTGACGTCGA ACAACCTGGC CAACGTCAAC ACCAACGGCT TCAAGAAGGA CCGGGCCAAC
TTCGAGGATC TGTTCTACCA GACCGTCCGG CAGCCCGGCT CCCGCGCCAG CCAGGACAAC
CTGCTGCCCT CGGGGCTGAT GCTCGGCACC GGCTCGCGGG TCATGGGCAC CGAGAAGATC
CACTCCCAGG GCAATGTGCA GCAGACCGAG CGCAGCCTCG ACGTGGCCAT CGAGGGCAAG
GGCTTCCTGC AGGTCCTTCG CCCCGACGGC CAGGTGGGCT ACACCCGGGA CGGCGCCCTG
CAGCTCAACG AGAATGGCGA GATCGTCACC TCCGGTGGCT ACCTGCTCGA GCCGGGCATC
CAGGTCCCCG AAGAGGCCGA GACCATCAGC ATCGGCAGCG ACGGCACGGT CAGCGCCAAG
ATCCCCGGCG ACGAGGAGCC CGAAGAGATC GGTCAGATCG AGCTGGCCGA CTTCATCAAC
CCCTCCGGGC TGGAGCCGGT GGGCGAGAAC ATGTTCCTCG AGACCGCTGC GAGCGGTGCT
CCCGAGGTCG GCGCCCCCGG GGAAGGGGCG CTGGGCAATG TCATGCAGGG GGCCCTGGAG
ACCTCCAACG TGAACATCGC CGAAGAGCTG GTGAACATGA TCGAGAACCA GCGCGGCTTT
GAGACCAACA CCCGGGCCAT CTCGACCACC GACGAGATGC TGCAGTTCCT CAACCAGAAC
GTCTAA
 
Protein sequence
MDPALWVAKT GLDAQQKSMQ VTSNNLANVN TNGFKKDRAN FEDLFYQTVR QPGSRASQDN 
LLPSGLMLGT GSRVMGTEKI HSQGNVQQTE RSLDVAIEGK GFLQVLRPDG QVGYTRDGAL
QLNENGEIVT SGGYLLEPGI QVPEEAETIS IGSDGTVSAK IPGDEEPEEI GQIELADFIN
PSGLEPVGEN MFLETAASGA PEVGAPGEGA LGNVMQGALE TSNVNIAEEL VNMIENQRGF
ETNTRAISTT DEMLQFLNQN V