Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0490 |
Symbol | |
ID | 4710286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 558660 |
End bp | 559562 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639854948 |
Product | periplasmic solute binding protein |
Protein accession | YP_001002079 |
Protein GI | 121997292 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGTTCA AGCGCATCCT TGCCGCCGCG GTCCTCAGCA CCGCCCTCGC CGCCGGCCCG GCCGCGGCGG AGCGGCTGGA GGTGGCCGCG ACCACCACCA ACATGGCCAT GATCACCCAG GAGGTGGGGG GCGACCATGT GGAGGTCACC ACCATGGCCC CGCCGGACCG CGACGCCCAC TACCTCGAGG CGCGGCCGTC GATGATGGCC GCCCTGCGCG GGGCCGATCT GATCGTCTCC GTGGGCGCCG AACTGGAGGA GGGCTGGGTG CCCGCCGCCA TCCGCGGGGC CAACAACCCG GATGTACAGA TCGGCCAGGA CGGCTACTTC GAGGCCGCCG CCCAGGTGGA GCTGATCGGC CAGACCGGCC ACGCCGACCG CGCCCGGGGC GACGTCCACC CGGCGGGCAA CCCCCACGTC TACCTGGATC CGGTGCGCCT GGCCGAGGTC GGCCAGGCCC TCGCCTCGCG TCTGGCCGAC CTGGCCCCGG AGCACGCCGA GACCTTCTAC GACAACGCCG ACGCCTTCCA GGCCGCCGTC GAGGAGCGGA TGCCGGACTG GGAGGCGCGC GTCGCCGACG CCCCCGGGGT GCTCCTCTTC CACGAGGACA TCGACTACCT CCTCCACCGC CTGGATGTAC CGCTGCACGG CTACCTGGAG CCGCTGCCCG GGGTGCCGCC AACGGCCCGC CACCTCCGGC GGCTGGTTAA CGAGCTGGGC GACGAGCGGG GGGTCACCCT GTTCACCGAC TTCCAGCCGG CGGACGGCGC GCGCTTTATC GAACGCCAGC TGGGCTGGTC CTACTACAGC CTGCCCACCC AGGTGCCGGT GGACGGCGAC GCCGAGGACT ACTTCCAGGT CATCGACGAC CTGGTTGAGG CCATCGCCTC GCCAGCCTCC TGA
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Protein sequence | MMFKRILAAA VLSTALAAGP AAAERLEVAA TTTNMAMITQ EVGGDHVEVT TMAPPDRDAH YLEARPSMMA ALRGADLIVS VGAELEEGWV PAAIRGANNP DVQIGQDGYF EAAAQVELIG QTGHADRARG DVHPAGNPHV YLDPVRLAEV GQALASRLAD LAPEHAETFY DNADAFQAAV EERMPDWEAR VADAPGVLLF HEDIDYLLHR LDVPLHGYLE PLPGVPPTAR HLRRLVNELG DERGVTLFTD FQPADGARFI ERQLGWSYYS LPTQVPVDGD AEDYFQVIDD LVEAIASPAS
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