Gene Hhal_0490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0490 
Symbol 
ID4710286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp558660 
End bp559562 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content72% 
IMG OID639854948 
Productperiplasmic solute binding protein 
Protein accessionYP_001002079 
Protein GI121997292 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTTCA AGCGCATCCT TGCCGCCGCG GTCCTCAGCA CCGCCCTCGC CGCCGGCCCG 
GCCGCGGCGG AGCGGCTGGA GGTGGCCGCG ACCACCACCA ACATGGCCAT GATCACCCAG
GAGGTGGGGG GCGACCATGT GGAGGTCACC ACCATGGCCC CGCCGGACCG CGACGCCCAC
TACCTCGAGG CGCGGCCGTC GATGATGGCC GCCCTGCGCG GGGCCGATCT GATCGTCTCC
GTGGGCGCCG AACTGGAGGA GGGCTGGGTG CCCGCCGCCA TCCGCGGGGC CAACAACCCG
GATGTACAGA TCGGCCAGGA CGGCTACTTC GAGGCCGCCG CCCAGGTGGA GCTGATCGGC
CAGACCGGCC ACGCCGACCG CGCCCGGGGC GACGTCCACC CGGCGGGCAA CCCCCACGTC
TACCTGGATC CGGTGCGCCT GGCCGAGGTC GGCCAGGCCC TCGCCTCGCG TCTGGCCGAC
CTGGCCCCGG AGCACGCCGA GACCTTCTAC GACAACGCCG ACGCCTTCCA GGCCGCCGTC
GAGGAGCGGA TGCCGGACTG GGAGGCGCGC GTCGCCGACG CCCCCGGGGT GCTCCTCTTC
CACGAGGACA TCGACTACCT CCTCCACCGC CTGGATGTAC CGCTGCACGG CTACCTGGAG
CCGCTGCCCG GGGTGCCGCC AACGGCCCGC CACCTCCGGC GGCTGGTTAA CGAGCTGGGC
GACGAGCGGG GGGTCACCCT GTTCACCGAC TTCCAGCCGG CGGACGGCGC GCGCTTTATC
GAACGCCAGC TGGGCTGGTC CTACTACAGC CTGCCCACCC AGGTGCCGGT GGACGGCGAC
GCCGAGGACT ACTTCCAGGT CATCGACGAC CTGGTTGAGG CCATCGCCTC GCCAGCCTCC
TGA
 
Protein sequence
MMFKRILAAA VLSTALAAGP AAAERLEVAA TTTNMAMITQ EVGGDHVEVT TMAPPDRDAH 
YLEARPSMMA ALRGADLIVS VGAELEEGWV PAAIRGANNP DVQIGQDGYF EAAAQVELIG
QTGHADRARG DVHPAGNPHV YLDPVRLAEV GQALASRLAD LAPEHAETFY DNADAFQAAV
EERMPDWEAR VADAPGVLLF HEDIDYLLHR LDVPLHGYLE PLPGVPPTAR HLRRLVNELG
DERGVTLFTD FQPADGARFI ERQLGWSYYS LPTQVPVDGD AEDYFQVIDD LVEAIASPAS