Gene Hhal_0485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0485 
Symbol 
ID4710973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp554279 
End bp554740 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content73% 
IMG OID639854943 
Productflagellar biosynthesis protein, FliO 
Protein accessionYP_001002074 
Protein GI121997287 
COG category[N] Cell motility 
COG ID[COG3190] Flagellar biogenesis protein 
TIGRFAM ID[TIGR03500] flagellar biosynthetic protein FliO 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.188569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTTGC GACTGCGCTC CCCGGCGTCG CTTTTCCGGC GCCCGCGCCG GGCGACGGTG 
GCGCTGGGCG TCAATCTGCT GGCGCTCCCG GCGCCGGCGT GGGCCGAGAC CGTCCCTGGG 
GTCGAGGCCG AGGCCATTGC CCGGGTGATC GTCGCCCTGC TGGTGGTGCT GGCGGTGATC 
ATCGGGCTGG CCTGGCTGCT GCGCCGCTTC GGTGGCGGCG CGGTGGGCGG CACGGGGCAG 
ATGCGCGTGC TCGGCTCGCT GCCGGTGGGG CAGCGTGAGC GCGTGGTGCT GGTTCAGGTT 
GGTGACACGC AACTGCTGCT CGGTGTGGCG CCCGGGCGGG TACAGACCTT GCATGTGCTG 
GAGACCCCAG TGACCGGCGT CGGTGGCGAG ACCGGCGACG GGCAAGGCGG CCCGTTCGCG 
GCGCGGCTGC GTCGCTTGAT GCAGCAATCC GATCAGCAGT AG
 
Protein sequence
MALRLRSPAS LFRRPRRATV ALGVNLLALP APAWAETVPG VEAEAIARVI VALLVVLAVI 
IGLAWLLRRF GGGAVGGTGQ MRVLGSLPVG QRERVVLVQV GDTQLLLGVA PGRVQTLHVL 
ETPVTGVGGE TGDGQGGPFA ARLRRLMQQS DQQ