Gene Hhal_0481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0481 
Symbol 
ID4709339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp551152 
End bp552327 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content66% 
IMG OID639854939 
Productflagellar biosynthetic protein FlhB 
Protein accessionYP_001002070 
Protein GI121997283 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID[TIGR00328] flagellar biosynthetic protein FlhB 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCCAGG AGAGCGAAGA CGGGCAGGAA AAAACCGAAG ACCCGACCCC GAAACGGCGC 
GAGGAATCGC GCAAGAAGGG GCAGGTCCCG CGCTCGCGGG AGCTGACCAC CATGCTGCTG
CTGCTCGTGG CCGCCGGTGC GTTGCTGGCG CTGGGGCCGT TCATGGGCAA TCAGCTGACC
GCGCTGCTGG AGTGGTCGTT CACCATCGAT CGCAGCCACA TCTACGACCC CGGGATCGTC
ATCGAGCGGC TGCACGAGGC GCTGGGGCGT GGATTGCTCA CTGTGTTGCC ATTCATCGCG
GTGATGCTCG CCGCTGCGGT GATCGCGCCC ACCGCCCTGG GCGGGTGGAG CTTCTCCTTC
CATCCGATGC AGCCCAAGCC CGAAAAGCTC AGCCCCATCA AGGGGTTCCA GCGCATGTTC
GGGACCAAGG CGGCGGTGGA GCTGGGTAAG GCCTTGGGCA AGGTGCTGGT CATCGGCGGC
ACCGCCGTCG GGCTGTTCGT GCTCTTCTGG GACAACTTCT ACACCATGAG TCGCGCCCCG
CTCGAGCCGT CCATGGCCGA GGGTATGCGG CTGTTCTATA TCTTCTTTTT CCTGTTGGCG
CTATCGATGC TGGTGGTGGT GGCCATCGAC ATCCCCTACC AGATCTACGA CCACACCCAG
AAGATCCGCA TGACGCGGCA GGAGGTGAAG GAGGAGTTCA AGCAGACCGA GGGTAAGCCG
GAGGTCAAGC AGCGGGTCCG CGAACAGCAG CGGGAGATGA CCAACCGGCG GATGATGGAG
AATGTTCCCG ATGCCGACGT GGTCATCACC AACCCGGCCC ACTACGCCGT GGCGCTCAAG
TATGATCAGT CGACCATGCG CGCCCCCACC GTGGTGGCCA AGGGCGCCGA TCTGCTCGCC
GCGCGCATCC GCGAGCTGGC CGAGGAGAAC GACATCCTGA TCTTCCAGGC CCCGCCGCTG
GCGCGCGCGT TGTATCATTC CGCCGATCTG GACCAGGAGA TCCCGGGCGC GCTCTACTTC
GCCGTGGCCC AGGTGCTGGC CTACGTCTAT CAGTTCCAGG CCGCGCAGCG CCGCGGCTGG
ACGCCGCCGC AGCGGCCGGA GCCAGAGGTC CCGTCCGGCT ACGACACCGG CGGCGAGGCG
TCATCCGACG AGCGAGGAGG GGATAGCCGC CGATGA
 
Protein sequence
MAQESEDGQE KTEDPTPKRR EESRKKGQVP RSRELTTMLL LLVAAGALLA LGPFMGNQLT 
ALLEWSFTID RSHIYDPGIV IERLHEALGR GLLTVLPFIA VMLAAAVIAP TALGGWSFSF
HPMQPKPEKL SPIKGFQRMF GTKAAVELGK ALGKVLVIGG TAVGLFVLFW DNFYTMSRAP
LEPSMAEGMR LFYIFFFLLA LSMLVVVAID IPYQIYDHTQ KIRMTRQEVK EEFKQTEGKP
EVKQRVREQQ REMTNRRMME NVPDADVVIT NPAHYAVALK YDQSTMRAPT VVAKGADLLA
ARIRELAEEN DILIFQAPPL ARALYHSADL DQEIPGALYF AVAQVLAYVY QFQAAQRRGW
TPPQRPEPEV PSGYDTGGEA SSDERGGDSR R