| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0466 |
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| Symbol | |
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| ID | 4711525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 534436 |
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| End bp | 535398 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639854925 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001002056 |
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| Protein GI | 121997269 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCAC AGCACGCCGC GCACGCGCAA GCCGACACCA TCACCGCCCT GGGAGCGTAT
CTCACCACCC TGGCCGAGAG CCACGGCCAG GACGAGGTCG CACAGGCCCT GTGCGAGATC
GCCACCCAGA CGCTGCCGCG CAGCTGTGGC GAGCTCTGGC AGCTCTCGCT CGATCGCGAG
GGCTGGTACC ACGGCGGGGG CTGGCAGACC GGCACCGTCC TGCCACCGCA GGGGTACACC
CTGCGGGCGA CGCTGCCCCG GGGCCCCACC GACGAACTGC GCCTGCCCCT GCAGGCCCAC
GGCCTGACCG TCGGCGAGGT CCGGGCCCCC TATGAGGGCC TTGAGTCGGA GCAGGAGCAG
CAGCTGCTGC AGACCCTGAG CACCGCCGCG GCCATCAGCC TTTCCGGTCA CCTGCTGCAG
CGCCGGGTCC GCCACCGCAA TGTCCGGGAT CCGCTCACCG GCCTGTTCAA CCGGCGCTAC
CTCGAGGACA CCCTCGAGCG CGAACTCCAC CGCGCCCGCC GGGTGAACGC CGGGCTGGTG
CTGATCCGCC TGGAGGTCGA CACCCTGGAT GCCTTCGCCG CCGAACACGG CAGCGAAACC
GCGGACCGGC TGATGCAGGC CATGGCCGAC GCCGTCCACC ACGCCTTCCG CGGCTCGGAC
GTCTGCTGCC GGGCCGGTGA TGACGGCTTC GGTATCCTGC TCCCCGATGC CAGCCTGGAT
AACGGCGCCA TGCGCGCCGA GGCGGTGCGC GAGGAACTCG CCGAGCTGCG CATCCATCAG
CGCGGTCGCC CCCTCGGGCC GGTGACGGTC TCCGCCGGCG TCGCCGCCTA TCCGGATCAC
AGCAGCAACC GGGACCTGTT GCTCGATGCC GCCGAGAGCG CGGTCACCCG GGCCCGCGAC
GAAGGCGGCG ACGTGCTGCG CATCGCTGAG CTCGTCTCGC CCCCCAATCC CAACCAGATC
TGA
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| Protein sequence | MSAQHAAHAQ ADTITALGAY LTTLAESHGQ DEVAQALCEI ATQTLPRSCG ELWQLSLDRE
GWYHGGGWQT GTVLPPQGYT LRATLPRGPT DELRLPLQAH GLTVGEVRAP YEGLESEQEQ
QLLQTLSTAA AISLSGHLLQ RRVRHRNVRD PLTGLFNRRY LEDTLERELH RARRVNAGLV
LIRLEVDTLD AFAAEHGSET ADRLMQAMAD AVHHAFRGSD VCCRAGDDGF GILLPDASLD
NGAMRAEAVR EELAELRIHQ RGRPLGPVTV SAGVAAYPDH SSNRDLLLDA AESAVTRARD
EGGDVLRIAE LVSPPNPNQI
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