| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0460 |
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| Symbol | |
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| ID | 4711507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 524963 |
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| End bp | 527680 |
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| Gene Length | 2718 bp |
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| Protein Length | 905 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639854919 |
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| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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| Protein accession | YP_001002050 |
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| Protein GI | 121997263 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGAGG GTGCAGGGCA GGCTGAGCAG CGGCAAGCGG ACTGGCACGC GATACACTCC
GAGGAGGTGG TTAGCCGCCT TGAGGCGCAG CCGGGCAGCG GGCTGAGCAG CGAGCAGGCC
GAGCAGCGGC TCGAGCATTA CGGCCCCAAT CGGCTCCGCC CGCCGGAGCG CGAGGGTCCG
ATCAAGCGCT TCCTCAAGCA GTTCCACAAC GTCCTCATCT ACATCCTCAT CGTTGCCGGC
GTGGTCACCG CGCTGCTCGG TCACACCCTG GACAGCGCGG TCATCTTCGG CGTGGTGCTG
ATCAACGCCA TCATCGGTCA TGTCCAGGAG GGCAAGGCCG AGAAGGCCCT GGACGCGATC
CGTGGCATGC TTTCGCCACG GGCGGTGGTC CTGCGGGATG GCGAGCGCAT GACCGTCAAC
GCCGAGCATC TGGTGCCCGG CGATATCGTC CTGCTCGAGG CTGGGGACCG AGTACCCGCC
GATGTGCGCA TCCTCGAGGC GCGCAACCTG CGCCTCGACG AGGCTGCGCT GACCGGGGAG
TCGGTGCCGG TGGAGAAGGC CGACGAACCG GTGGCCGTCG ATGCCGAGCT CGGCGATCGC
AAGTCGCTGG CCTTCTCCGG AACCCTGGTT GCCTACGGCC GCGGCCAGGG CGTGGTGGTG
GGCACCGGCG AGGCCACTGA GATCGGCAAG GTCAGCAGCC TGATTGCCGG GGTCGAGTCG
ATCACTACAC CGCTGCTGCG CCAGGTGGCC GAGTTCGGGC GCTGGCTGTC GGTGGCCATC
GTCCTGCTCG CCGCGGCGAC CTTCCTGATC GGCTACTATC TGCAGGCGTA TACCGCCATC
GAGACCTTCC TCGCCGCCGT GGCCCTGGCC GTTGCCGCCA TCCCCGAAGG CCTGCCGGCG
ATCATGACCA TCACCCTGGC CATCGGTGTG CAGCGCATGG CCGGGCGCAA CGCCATCATC
CGGCGCCTGC CGGCGGTAGA GACTCTCGGT TCGGTGACCA CCATCTGCTC GGACAAGACC
GGGACGCTGA CGCGCAACGA GATGACCGTG CGCAGTGTGG TGACCGCCGA GCAGGCCTAC
GAGGTCAGCG GCGTGGGCTA CGTCCCCGAT GGGGCGTTCC ACCGCAACGG GGGCGAAACG
GTCAGCGCCG GCGAGGAGCC GGTGCTGGCG CAGATGCTGC GTGGCGTGGC GCTGTGCAAC
GAGGCTGCGC TCTACCATCG CGACGGCAAT TGGCGCCTGG AGGGGGATCC CACCGAGGGT
GCGCTGATGG TGGCGGCGGT CAAGGGCGGC TTTGAGCGCC GCGAGCTCGA TCGCTCCTTC
CCGCGGGTCG ATGTGATCCC GTTCGAGTCG TCCTACAAGT TCATGGTGAC CCTCCACCGC
GAGCGCGAGG ACGGCGGGCT GCTGATCATG AAGGGTGCCC CGGAGCGGGT GCTGGCTGCC
TGTACCCGGG AGCGGACCGC CGACGGCGAT CGCCCCCTGG ACCGCGATCA TTGGCAGGAG
GTGCTCGACG GCATCGCCTC CCGGGGGCAG CGGCTGCTGG CGGTGGCGGT CAAGGAGACC
GACCCCGATC ACCGCGAGCT GCTCTTCTCC GATGTCGAGG AGGGTATGGT GTTCCTCGGG
GTCATGGGGA TCATCGATCC GCCGCGGGAG GAGGCGATCG AGGCCGTGGC CGAGTGCCAC
CGGGCCGGCA TCGGCGTGAA GATGATCACC GGCGACCACG CCCTGACCGC CGGCGCCATC
GGTGAGCAAC TGGGTATCCG CGGCAAGCCG CTGGTCGGTC ACGAGATCGA GGCCATGGAC
GACGAGGAGC TCGGTCGCCG CTGCCTGGAG ACCGACGTCT TCGCCCGCAC CACGCCCATC
CACAAGCTGC GCCTGGTCCA GGCGCTGCAG GGGCACGGCC AGGTGGTGGC CATGACCGGG
GACGGGGTCA ACGATGCCCC GGCGCTCAAG CGCGCCGATG TCGGCATCGC CATGGGCAAC
AAGGGCACCG AGGCGGCCAA GGAGGCCTCG GAGATGGTCC TCGCCGACGA CAACTTCGCC
TCCATCGCCT ACGCGGTGGA GGAGGGGCGC ACGGTCTACG ACAACCTCAA GAAGGCGATC
CTCTACCTGC TGCCCACCAA CGGCGGGCAG GCGTTCACCA TCGTCATCGC CATCATGTTT
GGGCTGACTC TCCCGGTGAC GCCGGTCCAG GCGCTGTGGA TCAACATGGT CACCGCCGTG
ACCCTGGCCC TGGCGCTGGC CTTCGAGCCG CCGGAGCCGG GGCTGATGGA GCGCCGACCG
CGGGATCCGG CCAAGCCGAT CCTCTCCGGG TTCCTGATCT GGCGGGTCCT GTTCGTCTCG
GTGCTGTTGG TCATGGGCAC CTTTGGCCAC TACGTCTACA TGGAGGCGCA GGGGGTCTCT
GACGAGTTGG CCCGCTCGGT GGCCATCAAT ACCCTGGTTA TGGGTCAGGT CTTCTACCTG
TTCAACGCCC GCTACATCCT GGAACCGGTG ACCAGTGTCG CCGGCCTGCT CGGCAGCCGG
GCGGTGTTGA TCGCCATCGG CGTGCTCATC GTTCTCCAGG GGCTGTTCAC CTACGCCCCG
CCGGTGCAGG CGCTGTTCGG CACCGCCGGA CTGGGTCCCG AGGAGTGGCT GCGGGTGCTG
GTCTTCGGTG TCCTGCTGTT CGGCGTCGTC GAGCTGGAGA AGGCGGTCCT GCGGCGACGG
ATCTCGCCGG AGGATTGA
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| Protein sequence | MREGAGQAEQ RQADWHAIHS EEVVSRLEAQ PGSGLSSEQA EQRLEHYGPN RLRPPEREGP
IKRFLKQFHN VLIYILIVAG VVTALLGHTL DSAVIFGVVL INAIIGHVQE GKAEKALDAI
RGMLSPRAVV LRDGERMTVN AEHLVPGDIV LLEAGDRVPA DVRILEARNL RLDEAALTGE
SVPVEKADEP VAVDAELGDR KSLAFSGTLV AYGRGQGVVV GTGEATEIGK VSSLIAGVES
ITTPLLRQVA EFGRWLSVAI VLLAAATFLI GYYLQAYTAI ETFLAAVALA VAAIPEGLPA
IMTITLAIGV QRMAGRNAII RRLPAVETLG SVTTICSDKT GTLTRNEMTV RSVVTAEQAY
EVSGVGYVPD GAFHRNGGET VSAGEEPVLA QMLRGVALCN EAALYHRDGN WRLEGDPTEG
ALMVAAVKGG FERRELDRSF PRVDVIPFES SYKFMVTLHR EREDGGLLIM KGAPERVLAA
CTRERTADGD RPLDRDHWQE VLDGIASRGQ RLLAVAVKET DPDHRELLFS DVEEGMVFLG
VMGIIDPPRE EAIEAVAECH RAGIGVKMIT GDHALTAGAI GEQLGIRGKP LVGHEIEAMD
DEELGRRCLE TDVFARTTPI HKLRLVQALQ GHGQVVAMTG DGVNDAPALK RADVGIAMGN
KGTEAAKEAS EMVLADDNFA SIAYAVEEGR TVYDNLKKAI LYLLPTNGGQ AFTIVIAIMF
GLTLPVTPVQ ALWINMVTAV TLALALAFEP PEPGLMERRP RDPAKPILSG FLIWRVLFVS
VLLVMGTFGH YVYMEAQGVS DELARSVAIN TLVMGQVFYL FNARYILEPV TSVAGLLGSR
AVLIAIGVLI VLQGLFTYAP PVQALFGTAG LGPEEWLRVL VFGVLLFGVV ELEKAVLRRR
ISPED
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