Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0457 |
Symbol | |
ID | 4711476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 520546 |
End bp | 521514 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639854916 |
Product | patatin |
Protein accession | YP_001002047 |
Protein GI | 121997260 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.98723 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGAATG AGCAGAAGGC GAAACCGCGG GTGGCCCTGG CGCTGGGCAG CGGCTCGGCG CGGGGTTGGG CCCATATCGG TATCATCCGC GCCCTGGAGC GGGCCGGAGT GCGCCCGCAA GTGGTGGTGG GGACCTCCAT CGGGGCCCTG GTGGGGGCTT TCTACGCCGC CGGCAAGATC GATGTGCTCG AGCCGTGGGT GCGTAAGCTG ACCCGTCGCG ACGTGTTGGG CATGCTCGAC CCGAGCCTGC GCTCCACCGG TGGGCTGATC GAGGGGCGCC GGCTCTACGA CTTCTACCAG GAGCACCTCT CCGGAGCGGC TATCGAAGGG CTGGCCATGC CCTACGCCGC TGTGGCCACC ACGCTCGGTC GGGGCACCGA GGTGTGGTTG CGCGAGGGTG ATCTGGCGGA CGCCGTGCGC GCCTCGAGCG CGCTGCCCGG GGTGTTCAGC CCGGTGCGCC GGGGGGGTGA CTGGCTGGTC GACGGCGGAC TGGTCAACCC GGTGCCGGTG AGCGTCTGCC GCGCCCTCGA CGCCGACGTG GTCATCGCGG TGAATCTCAA TGGCGATCTG GTGGGGCGCC ACCTGCGAGA GAGCGCCCAT CACGCCGGTA CCGGGGTCGA CCCGGAGCGC TGGCTGCAAC AGCTGCCCGC CGGCGTGCGT AGCCACGCCA AGACGCTGGT CGGGCTCTGG GGCGATTGGA CCGGGGCGCG GGACGCCGAG CGCAGCGAGG CGCCGGGCGT CTTTGAGGTG CTGGCCGGAT CGCTGAACAT CATGCAGGAC CGCATCACCC GCAGTCGGAT GGCTGGCGAT CCCCCCGAGC TGATGCTCGC GCCGCGCCTG GCCCACATCG GGCTGCTGGA GTTCCACCGT GCCGAAGAGG CGATCGGCAT CGGCGAGGCG ATGGTCGAGC GGATGTTGCC CTCCATCCAG GATCTGATCC AAGGAAGCAC GGGCGATCAG GTAGGATAA
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Protein sequence | MVNEQKAKPR VALALGSGSA RGWAHIGIIR ALERAGVRPQ VVVGTSIGAL VGAFYAAGKI DVLEPWVRKL TRRDVLGMLD PSLRSTGGLI EGRRLYDFYQ EHLSGAAIEG LAMPYAAVAT TLGRGTEVWL REGDLADAVR ASSALPGVFS PVRRGGDWLV DGGLVNPVPV SVCRALDADV VIAVNLNGDL VGRHLRESAH HAGTGVDPER WLQQLPAGVR SHAKTLVGLW GDWTGARDAE RSEAPGVFEV LAGSLNIMQD RITRSRMAGD PPELMLAPRL AHIGLLEFHR AEEAIGIGEA MVERMLPSIQ DLIQGSTGDQ VG
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