Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0392 |
Symbol | |
ID | 4711408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 457196 |
End bp | 458113 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639854855 |
Product | homocysteine S-methyltransferase |
Protein accession | YP_001001988 |
Protein GI | 121997201 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2040] Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.108543 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAGG AAAGAGATGT CGTACTGCTG GACGGCGGGA TGGGCCAGGA GCTCCGGCGG CGCAGCAGTC AGCCCGTCAC ACCGCTTTGG TCGGCCCAGG TCATGCTGGA CGAGCCCGAT CTGGTCACCG CCGCCCATCG TGATTTCATC CAGGCCGGCG CGCGGGTCAT TACGGCCAAT ACCTATAGTG CGACGCCGCA GCGCCTGGCC CGCGACGGGG CGCCCGAGCT GTTCGATTCG CTCCATGCCG CTGCGCTGGA CGCGGCCCGC CAGGCGCGCG ACGCGTCCGG TCAGCAGGAT GTGCGCATCG CCGGTTGCCT GCCGCCGCTG GTAGCCAGCT ATCGCCCGGA TGTGGCACCG AACGACGCCG ACTGCCTCGA GGGCTATCGC CGCATGGTGG AGGCCCAGGC CCAGGCCCAG GGCGTCGATC TTTTCATCTG CGAGACGATG TCCCTGGCCC GCGAAGCGCG GGCGGCGACC GAGGCAGCGG TCGAGAGCAA CCTACCGGTG TGGGTGGCCT TCACGGTGGA CGATGGCGAC GGTACGCGCC TGCGCTCGGG CGAATCGCTA ATCCAGGCGG CCCAGGCGGT TGTGGCCGCC GGTGCCGAGC GCGTGCTGGT CAACTGCGCC ATCCCCGAAG CGGTCACCAC CGCGATGGGT GAACTCACCG GACTGGGGGT GCCGTTCGGC GGGTATGCCA ACGCGTTCAC CTCCGTGGCC GCGCTTCAGC CCGGTGGTAC CGTGGATGTG CTCGAGTCGC GCACGGATCT GGACCCGGCC GCCTACGCCG AGCACGCGCT TCACTGGGTG GAACAGGGCG CGACCCTGGT GGGCGGTTGC TGCGAAGTGG GCCCGGCCCA TATCGCGGAA CTGGCGGAGC GATTGACTGC TGCGGGGTAC CGGGTCGTGT CTTCCTGA
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Protein sequence | MTQERDVVLL DGGMGQELRR RSSQPVTPLW SAQVMLDEPD LVTAAHRDFI QAGARVITAN TYSATPQRLA RDGAPELFDS LHAAALDAAR QARDASGQQD VRIAGCLPPL VASYRPDVAP NDADCLEGYR RMVEAQAQAQ GVDLFICETM SLAREARAAT EAAVESNLPV WVAFTVDDGD GTRLRSGESL IQAAQAVVAA GAERVLVNCA IPEAVTTAMG ELTGLGVPFG GYANAFTSVA ALQPGGTVDV LESRTDLDPA AYAEHALHWV EQGATLVGGC CEVGPAHIAE LAERLTAAGY RVVSS
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