| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0389 |
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| Symbol | |
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| ID | 4709750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 454072 |
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| End bp | 456075 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639854852 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001001985 |
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| Protein GI | 121997198 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCCGA GGCGATCGTG TACAGCCCCC TTTTTCAGGT CCCTTACGCT TTTCAGCGGT
GGTTTGGTGA CGCTCCTTCC CGTATCGTTG CCCGCCAAAG ATGCGGATGA CTTGCCTGTT
GTGCGTGTCG AGTCCAGCGT CGATTCGCTG GGGCGGGGCT CGAGCCGCGA AGAATTCCAG
AGGCGCCAGT CCTCGCGCAG CGGCGAGCTC TTTCGGGGTG ATGCGTCAGC CACCGTAGGG
GGCGGCAGTC GCAACGCCCA GCGCCTCTAC CTGCGCGGGG TTGAGTCAAA CAACCTCAAC
GTGACCGTCG ATGGTGCTCG GCAAGGTCGC GACCTCCACC AGCACCGTGG TGGCCTAACC
GGTCTCGATC CGCAGCTGCT CGATGACGTG GAAGTCGATA CGCGGCCTGC GGCGGATCAA
GGTCCCGGCG CGCTGGGTGG CAGCGTACGC TTCCGGACGG TCGACGCGCA GCAGCTCCTC
GATCCTGATG AGCAGACGGG TGCACGCTTG AGGGCCGGTT ACGCAACAGC CGATTCTTCC
GAGCAGGGAT CAGCCACTGT CTTTCAGCGG TTGGGTTTCG ATTGGGGCGC CCTCGCCCAT
GTGAGTGGGG CGAACCGGGA CGATTACGAG ACCGGGGGCG GTGACAACAT GCCGTACTCG
GGCGGAGGCG ATCGTAGCTA CCTGCTGCAG GCTAGCCGAA TGCCTGTGCA CGGGCATGAA
CTGCGCCTCG GTGTCCAGCG GCACAGCTTT GAGGGCGATA CGCTCTCCGG TGGGGCGGGC
AGTGATTTTG GCGATCCCCG GGTAGAGCAC CGAGGGGAGC CGGAAAAACA GGAGCTGCGA
CGGGACACGT GGACGGTGGA GCACCGTTAC GACCCCACCG ACCCCAACGT GGACTGGCAG
GCACGGGTTT ATCGCAACGA TAATCGGCTC AAACGTCTGG ATCAGGGCAC CGAGACGCGC
GCACTTGAGC ACGGCGGCGA TCTTCGCAAC ACCTTCTCCC TCAATGCCGG ACCGACGCGT
CACCAGCTCA CCGCGGGTTT CGACTACTAC ACCGAGGATG GTCGTCTCGA GCAGGACGAC
GGCCCGCGGC TGAGCTACAC GGACCGCAAC TTCGGTGCCT TCCTGCAGAA CCGCATGGAG
TGGGAACGAC TCCGCCTTTC GAGTGGCCTG CGTTTCGATG ACTACACCAG TGCCCTGGGA
GAGCGGAACC CCGAGGGTGA CGCTTTTTCC CCCAACCTGA GTGCAGAACT CGATCTTGCG
GCGGGCTGGG CGGTCTTCGG CGGTTACGGG GAGGCAGCCA GAGGTCCTGG CGGCACAATG
CCCATCGGCT GGGTGCAGTA CATCGAAGAG GGCAACGACG ATCAGTCTTT AAAGACCGAG
GAGTCCCGCC GCAGCGAGGG CGGCCTGCGG TATCAGGGCC GGGGTCTGGT CGCCTCCCGT
GATCGCCTGA ACCTCGAGGC GACGGTTTTC GAGACGCGCA TCGACAACAG CCTTGAACGC
GTTGGCGGTG GTCCCCCGCA CCAATCGGGT GTTCGTCTCG GGCAGCGCGA TGTCCGGATC
AGCGGCTATG AGCTGCGGGC CGCATGGGGG GTGAATGCCT ATGACACGCG GCTGTCGTTC
CTGAGCGCCG AGACGGAGGA CGACGATGGC GACCCGGCTG GGGTTAGCCG TCGTCTGGCC
GGAAGTGGTG GTGATCGTCT GGTCTGGGAT CACCGTTGGG CGGCTCATGA AACCCTGACC
CTGGGGTATA CGCTCACCTG GGTGGGGGAT GACACCGATG TACCTGACGA TGAGCCGGAG
CGCGACGGTT ATCACCTTCA CGACATCCAG GTCCAGTGGC AGCCGTGGGC GGATGAGCAG
GTCACGCTGG GGGTGGTCGT GAACAACCTC TTTGACGAAC AGTATGCCGA GCACACATCG
CTGGTGTCGG AGCAGGATGG TGAGCTGATT GTTCGCGATG AGCCGGGGCG GGATATCCGC
CTGGAAGCGG CGCTGCGTTT TTGA
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| Protein sequence | MHPRRSCTAP FFRSLTLFSG GLVTLLPVSL PAKDADDLPV VRVESSVDSL GRGSSREEFQ
RRQSSRSGEL FRGDASATVG GGSRNAQRLY LRGVESNNLN VTVDGARQGR DLHQHRGGLT
GLDPQLLDDV EVDTRPAADQ GPGALGGSVR FRTVDAQQLL DPDEQTGARL RAGYATADSS
EQGSATVFQR LGFDWGALAH VSGANRDDYE TGGGDNMPYS GGGDRSYLLQ ASRMPVHGHE
LRLGVQRHSF EGDTLSGGAG SDFGDPRVEH RGEPEKQELR RDTWTVEHRY DPTDPNVDWQ
ARVYRNDNRL KRLDQGTETR ALEHGGDLRN TFSLNAGPTR HQLTAGFDYY TEDGRLEQDD
GPRLSYTDRN FGAFLQNRME WERLRLSSGL RFDDYTSALG ERNPEGDAFS PNLSAELDLA
AGWAVFGGYG EAARGPGGTM PIGWVQYIEE GNDDQSLKTE ESRRSEGGLR YQGRGLVASR
DRLNLEATVF ETRIDNSLER VGGGPPHQSG VRLGQRDVRI SGYELRAAWG VNAYDTRLSF
LSAETEDDDG DPAGVSRRLA GSGGDRLVWD HRWAAHETLT LGYTLTWVGD DTDVPDDEPE
RDGYHLHDIQ VQWQPWADEQ VTLGVVVNNL FDEQYAEHTS LVSEQDGELI VRDEPGRDIR
LEAALRF
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