Gene Hhal_0354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0354 
Symbol 
ID4711330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp411382 
End bp412143 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content66% 
IMG OID639854817 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001001950 
Protein GI121997163 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00289499 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAAAT GGGGAATGGT CATCGACCTC GACAAGTGCA CCGGCTGCCA GGCCTGCACC 
ACGGCCTGCG CCATGGAGAA CAACACCCTG CCCGGCGAGT CCTGGCAGGA CGTACTGTTC
TACAACGAAG GACGCTATCC GCACACCTCG ATCAAGTGGT TCCCGCGGCC CTGCATGCAG
TGCGAGAACC CCACCTGCGT CTACGTCTGC CCCACCCGGG CAACCTACAA GACCGAAGAC
GGGGTGGTGC TGGTGGACTG GGACCGGTGC ATCGGCTGCA AGTACTGCAT GATCGCCTGC
CCCTACGGGG TGCGCTTCTA CGCCGACGAG AAGCCGCTCA TCGAGCCGGA TCTGCGCGAG
GTCCACCCCG GCGAGGACGG GCAGATCTGG AGCCCGCCCT ACCAGGGGCC GAACCAGGAC
CACCGCACCG GCGTGGGCAT TCAGCCCAAG GGCGTGGTTT CCAAGTGCAC CTTCTGCTAC
CACCGCATCT CGCAGGCCCC GGAGGGCGTC GCCGACCTGG ACGAGGACAA CCCGGAGCTG
GTCGAGTACG TGCCGGCCTG CGTCCGCACC TGTCCGCCCA AGGCGCGCTA CTTCGGCGAC
CTCGACAACC CCGAGAGCCA GGTCAACCGA CTGATCGCCG ACAAGCGCGG CACGCGCATC
AAGGAAGAGA CCGGCAACCG ACCGCAGGTC TACTACCTGG GCGAACACGG CACCGTGCCG
ACGTTCGATC CGCAATTCGA ACACGACGAC CGGTCCTCGT GA
 
Protein sequence
MPKWGMVIDL DKCTGCQACT TACAMENNTL PGESWQDVLF YNEGRYPHTS IKWFPRPCMQ 
CENPTCVYVC PTRATYKTED GVVLVDWDRC IGCKYCMIAC PYGVRFYADE KPLIEPDLRE
VHPGEDGQIW SPPYQGPNQD HRTGVGIQPK GVVSKCTFCY HRISQAPEGV ADLDEDNPEL
VEYVPACVRT CPPKARYFGD LDNPESQVNR LIADKRGTRI KEETGNRPQV YYLGEHGTVP
TFDPQFEHDD RSS