Gene Hhal_0350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0350 
SymboldinG 
ID4711368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp404843 
End bp406978 
Gene Length2136 bp 
Protein Length711 aa 
Translation table11 
GC content73% 
IMG OID639854813 
ProductATP-dependent DNA helicase DinG 
Protein accessionYP_001001946 
Protein GI121997159 
COG category[L] Replication, recombination and repair
[K] Transcription 
COG ID[COG1199] Rad3-related DNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00468076 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGAGC CTGATATCAC CGACACCATC GCCACCGCCT ACCGCCGGGT CCGCGACGAG 
ATGCCCGGAT TCCGCGAGCG GGAGGCGCAG AAACGCATGA TCTGGGAGGT CGCCAAGGCC
TTCGATGCGG ATCACCCCCA CCGCCTGCTG GCCATCGAGG CGCCCACCGG CACCGGCAAG
AGCCTCAGCT ATCTGCTCGG CGGGGTACCC GTGGCCCGGA GCCGCGACCT GCCGCTGGTC
ATCGCCACCG CCACGGTGGG CCTGCAGGAG CAGATTCTCC ACCAGGACCT GCCCAAGCTG
GCCCGCTACG CCGGCATCGA GGTCGACGCC ACCGTGGCCA AAGGCCGCGG ACGCTACCTC
TGCCCGCGCA ACCTCAACGA GCTGGTCGGC CAGTCCGGGC AGGCTGAGTC GGGGGCGCAG
CAGGCGCTGG CCGGCGAGGT CCTGGGCACC GCGCGCTGGC CGCGCCCGCC GCAGCCGGGC
GAGCCCGAGC AGCTGCAGGC GATGGCCGAG GCCCTGGACG GGGAGCGCTG GGGCGGCGAC
CTGGACGAAT GGGCCGACGG CGTGGCCGAC GACCTGCGCC CGATGATCAC CTCCACCAGC
CACTCCTGCT CCGGGCGGCG GTGTGCCCAC TTCGAGGGCT GCCCGGTCTA CGCGGCCCGC
GACCGGGTGG CCCGCGCCGA GGTGGTGATC ACCAACCACG ATCTGCTCCT CGCCGACCTG
CAGCTCGGCG AGGAGCAGGG CGGCGTGCTG CTGCCGCCCC CGGAGCAGGC GCTCTACGTC
ATCGACGAGG GCCACCACCT GGCCGCCAAG GCGGTGCAGC GCTTCGCCGC CAGTGCCCGC
GTGCAGGCGG CGCGGACGTG GCTGGAGGAG GGCGAGGGCG TTGCCACGGA CACCGCGGCG
GTGCTGCCGG ACGACACGGC CGGCGAGCCG CCGGACGCCG AGGCGCAACG GCTGCAGGAA
CGCCTCAGCG AGGTGGCCGC CGCACTGCAG GAGGCGGACA CCTTCCTCCA GCACAACTAC
CGCGCCGACG CTGAGGGGGA GCGCTGGCGC TTCCGCGCCG GCCAGGCCCC CGACCCTGTG
CGCGAGCTGG CCGGGCGCGT GGCCGACCCG GCGCGGGGAC TCCACGAGGC CCTGCAGGCG
TTCACCGATC GGGTCTACAG CGCCCTGGAG GCGCAGCGCG GCGACACCCA GGAGCTGGAG
CGCCAGCTGC CGCGGCTCGG CTTCCTGCGC GAGCGGGCGG CGAACCTGGC CACCACCTGG
CAGCTGCTCG GCGAGCAGGA GGCTGCCGGC GTGCCGCCCG TGGCCCGCTG GGTGGAGCGC
CAGGCGGAGT CGGACGGTGC CGTGGATCAC CGGGTCTCGG TCTCGCCGGT CTCGGTGGCC
GGTGAGCTGG CCCGGCGGTT GTGGGATCGC TGTGCCGGTG CCGTGATCAC CAGCGCCACG
CTGAGGGCGC TGGGGCGCTT CGATCACCTG CGCAGCGATC TCGGTCTCCC CGAGGACGAC
GCCCTCATCA GCCAGGGGTG GCTGCCATCC CCCTTCGACT ACAGCCGCTC GCTGCTCCAC
GTACCGGCGC TGCGCAGTGA CCCGCGCAAC GCCGAGGCGC ACCTGGCCGA GGTCTGCCAG
TGGCTGCCGG AGCTCCTCGA CCCTTACGAG GCGGCGCTGG TGCTTTTCAC CAGCCGCCAG
CGCATGGAGC GGGTGGCCCA GGCCCTGCCG GAGACCCTGC GTGAGCAGCT GCAGTGCCAG
GGCGAACGTT CCCGCGAGGC GATGCTCGAG CGCCACCGCG AGGCCGTCGA TGCCGGGCAG
GGGAGCATCC TGTTCGGGCT GGCGGGCATG GCCGAGGGGG TGGATCTGCC CGGCCGCTAC
TGCGATCACG TGGTCATCGA GCGCATCCCC TTCGGTGTTC CCACCGAGCC GGTGATCGCC
ACCCTCGGCG AGTGGCTGGA GGATCAGCAG CGCTCCTCCT TCCACACCCT CAGCCTGCCG
CGGGCCTCGC TGCGCCTGAT CCAGGCCTGC GGCCGGCTGG TGCGCTCGGA GGATGATCGG
GGGCGGATCA CCATCCTCGA CCGTCGGGTG GTGACCCAGC GCTACGGTCG TCAGCTCCTC
GACGCCCTGC CACCGTTCCG CCGCCGCCTC GACTGA
 
Protein sequence
MPEPDITDTI ATAYRRVRDE MPGFREREAQ KRMIWEVAKA FDADHPHRLL AIEAPTGTGK 
SLSYLLGGVP VARSRDLPLV IATATVGLQE QILHQDLPKL ARYAGIEVDA TVAKGRGRYL
CPRNLNELVG QSGQAESGAQ QALAGEVLGT ARWPRPPQPG EPEQLQAMAE ALDGERWGGD
LDEWADGVAD DLRPMITSTS HSCSGRRCAH FEGCPVYAAR DRVARAEVVI TNHDLLLADL
QLGEEQGGVL LPPPEQALYV IDEGHHLAAK AVQRFAASAR VQAARTWLEE GEGVATDTAA
VLPDDTAGEP PDAEAQRLQE RLSEVAAALQ EADTFLQHNY RADAEGERWR FRAGQAPDPV
RELAGRVADP ARGLHEALQA FTDRVYSALE AQRGDTQELE RQLPRLGFLR ERAANLATTW
QLLGEQEAAG VPPVARWVER QAESDGAVDH RVSVSPVSVA GELARRLWDR CAGAVITSAT
LRALGRFDHL RSDLGLPEDD ALISQGWLPS PFDYSRSLLH VPALRSDPRN AEAHLAEVCQ
WLPELLDPYE AALVLFTSRQ RMERVAQALP ETLREQLQCQ GERSREAMLE RHREAVDAGQ
GSILFGLAGM AEGVDLPGRY CDHVVIERIP FGVPTEPVIA TLGEWLEDQQ RSSFHTLSLP
RASLRLIQAC GRLVRSEDDR GRITILDRRV VTQRYGRQLL DALPPFRRRL D