| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0336 |
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| Symbol | |
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| ID | 4711296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 386904 |
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| End bp | 388877 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639854799 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001001932 |
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| Protein GI | 121997145 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAGTC GCGACGTCCG GGGTGCGAAG CAGGGAGTGG GCGGGCACGA GATCGCGCCC
GAGGAATTGC TGGAGATGCT CGAGGGGGCG CCGGAGCTGA TCGGCGTCGC CGATCTGTGC
TGCGGCCATG AGTTGTACCG CAACCCGGCC ATGCGCCGGG TCATGGGCGA GCCGCGCCCG
GATATCCCCC TGGAGCAGCG CATTGCGCAA TCCCACCCGG AGTGGGCCGT GCGGCGGATC
CTCGACGAGG CGATCCCGGC CGCGCGGCGC GACGGGGTCT GGCAGGGCGA GACGACGGTG
CGCGCTGTCG ACGGGACGGA GTTTGCCGCG TTGCAGACGA TCATCGTCCA CGCCGATGAA
CACGGCGAGG TACAACGCTG CTCAACCATC ATCCGTGACG TCACCGAGCA GAAGGCGACC
GAGCACGCGC TGCGCAAGAG CGAGGAGCGC TACCGCCGGT TCCTCGAAGA TTTTCTCGGT
GTGGCCTACC AGATCGATCC AGACGATTAC CGGGTCGTCC TGCTGAGAGG GGCGGTGGAA
GCCATTACTG GCTACGACCG CGCCTACCTG CTCGATCACG GGTACTGCTG GGGGGATCTG
ATCCACGCCG ATGACTGGGA GCGGGTCGCT GCCGAAGACG CCGCGATCCG GCGCCGGGGT
GAGCGGGTGG GCGATCTGCG CTACCGCATC CGCCACCGCG ACGGATCCAC CCGCTGGGTG
CGGGATATCT GGCAGATGGT GGAGCTACCA GCCAATGGCC GGCAGGTCTT CCAGGGGGCG
CTCTACGACA TCACCGAGCG CATGGAACTC GAGCAGGCCC GCGCCCAGGC CGATCGGGAT
CGCACCACGT TCCTGGCGGC GGTCAGTCAC GACCTGCGCA CGCCGCTCAA TGCCGTGGTC
GGCTTCACGG GGTTGTTGCA GGACACCGAG CTGGATGCCG AGCAGCGCCG TTACGTGGAG
CTTTGCCGGA CTGCCAGTCA GACCCTGCTC GGCCTCGTCG ATACCCTGCT CAGCCTCTCC
CGGCTGGAGG CCGGGGAGAT GCAGCTGGAG TGTGCGCCCT TCGACCTGCG GGCCTTCCTG
GAAGACGAGG TCGGGCTGCT GGAGGCCCTG GCTGCCGAGA AGGGACTGAG CCTGAGCCTG
CACATCGACC CGGCGGTTCC CGGGTGGGTG GAGGGGGATG CGGTGCGCTT CGGGCAGGTG
CTCTACAACC TGGCGAACAA CGCCATCAAG TTCACCGAAC AGGGCAGCGT GGTCATCACC
GTGGAGCCGG CGGACGGCGA CGGGCTGTTG CGGGTCGCGG TCCGCGATAC CGGGCCGGGG
ATCTCCGAGG CGGATCAAAA GCGCATCTTC CGCGCCTTCA CCCAGGGCGG TGATGTCTTC
CGCCGGCAGG AGGGCAGCGG GCTGGGTTTG ACCATCTGCA AGGAGCTGGT GCGGCTGATG
GGCGGTGATC TTGGTCTGAA GAGCGCCCCC GGGGCCGGCT CCACCTTCCA GTTTACCGCC
CGGTTGCCGG CGGTGGAGCC TTCAGCGGCG GATGGCGCCG AAGCCACGGT CGCCGTGGAC
CGGTCGCACC CGCAGGCGGA CCGGCCGCTG CGCGTGCTGG TCGCCGAGGA CGAGCCGACC
AACGCCCTGC TGATCCGCAC CCTCCTGGAA CAGCGGGGCT GCCAGGTGAC GGTGGTCGAG
GACGGCCAGG CGGCGATCGA TCACTGTGCA GCCGAGCGCC CCGATCTGGT GCTGCTGGAT
GTGCAGATGC CCAGCGTGGA CGGCTGTCAG GCGCTGGGCC GGATCCGCCA GCACGAGTCG
CAGATCGGCG CGGCCCGCAC ACCGGTGGTG ATGTGCACCG CCCACGCCGT CGAGCAGATC
TGGGCGGACT GCGCCCGGCA GGGCAGCGAC TACATCCTGA CCAAGCCGAT CGATCGCGAT
GAGCTGTCCC GTGTGCTGGC CTGGGTGCGG CAGCCCGCCG TAGACGGACA CTGA
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| Protein sequence | MASRDVRGAK QGVGGHEIAP EELLEMLEGA PELIGVADLC CGHELYRNPA MRRVMGEPRP
DIPLEQRIAQ SHPEWAVRRI LDEAIPAARR DGVWQGETTV RAVDGTEFAA LQTIIVHADE
HGEVQRCSTI IRDVTEQKAT EHALRKSEER YRRFLEDFLG VAYQIDPDDY RVVLLRGAVE
AITGYDRAYL LDHGYCWGDL IHADDWERVA AEDAAIRRRG ERVGDLRYRI RHRDGSTRWV
RDIWQMVELP ANGRQVFQGA LYDITERMEL EQARAQADRD RTTFLAAVSH DLRTPLNAVV
GFTGLLQDTE LDAEQRRYVE LCRTASQTLL GLVDTLLSLS RLEAGEMQLE CAPFDLRAFL
EDEVGLLEAL AAEKGLSLSL HIDPAVPGWV EGDAVRFGQV LYNLANNAIK FTEQGSVVIT
VEPADGDGLL RVAVRDTGPG ISEADQKRIF RAFTQGGDVF RRQEGSGLGL TICKELVRLM
GGDLGLKSAP GAGSTFQFTA RLPAVEPSAA DGAEATVAVD RSHPQADRPL RVLVAEDEPT
NALLIRTLLE QRGCQVTVVE DGQAAIDHCA AERPDLVLLD VQMPSVDGCQ ALGRIRQHES
QIGAARTPVV MCTAHAVEQI WADCARQGSD YILTKPIDRD ELSRVLAWVR QPAVDGH
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