Gene Hhal_0283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0283 
Symbol 
ID4711185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp320527 
End bp321111 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content67% 
IMG OID639854743 
Productelectron transport complex, RnfABCDGE type, A subunit 
Protein accessionYP_001001879 
Protein GI121997092 
COG category[C] Energy production and conversion 
COG ID[COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA 
TIGRFAM ID[TIGR01943] electron transport complex, RnfABCDGE type, A subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.699909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGAAT ACCTGTTGCT GCTGATCGGC GTGGCCCTGG TGAACAACGT GGTGCTCACC 
CAGTTCCTGG GCCTGTGCCC GTTCATGGGC GTGTCGAATC GGCTGGATAC CGCCCTGGGC
ATGGGGCTGG CCACCACCTT CGTGCTCACG CTGGCGGCGG CAGCCGGATG GGTGATCGAG
CACGCCCTGC TCATCCCCCT GGGGCTGGAG TTCCTGCGCA TCCTCAGCTT CATCCTGGTC
ATCGCCGGGA CCGTGCAGTT CACCGAGATG GCCGTGGCCC GGGTCAGCCC CACCCTGCAC
CAGGTCCTGG GGGTGTTTTT GCCGCTGATC ACTACCAATT GCGCCGTGCT CGGCGTCGCG
CTGCTTAATA TCCAGGAGGC GCACACCTTC GCCCAGAGCC TGGTCTTCGG TGTCGGCGCG
GCGCTCGGTT TCACGCTGGT CCTGGTCCTC TTCGCCGGAT TGCGGGAGCG GCTGGCCACG
GCGGCGGTAC CGGCGGCCTT CGCCGGTGCG CCCATCGGGT TCGTGGTCGC CGGGCTGCTG
TCCCTGGCGT TCATGGGACT GACCGGACTG CCCGAGGGAG GGTGA
 
Protein sequence
MTEYLLLLIG VALVNNVVLT QFLGLCPFMG VSNRLDTALG MGLATTFVLT LAAAAGWVIE 
HALLIPLGLE FLRILSFILV IAGTVQFTEM AVARVSPTLH QVLGVFLPLI TTNCAVLGVA
LLNIQEAHTF AQSLVFGVGA ALGFTLVLVL FAGLRERLAT AAVPAAFAGA PIGFVVAGLL
SLAFMGLTGL PEGG