Gene Hhal_0267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0267 
Symbol 
ID4711151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp305740 
End bp306660 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content70% 
IMG OID639854727 
ProductUspA domain-containing protein 
Protein accessionYP_001001863 
Protein GI121997076 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCGTA CTCTTCCGGT TGATGGGATC AAGGGGGCCG CCATGAGCAT GCAGAAAGTC 
GTCTTCGCCA GCGATCTGTC CGAGCGCGCC GGACGGGCCG GGCGCCGCGC CGTGCAGCTG
GCCGAGGCCC ACGATGCGCA GTTGGAGGCG GTCCACGTGA TCGAGACCGA CTCGCCCGGG
TTGCGTGCGC TCAGTGGCTC GCCGGACCGG GAAGGCGTCT TCCAGGCCGC CGCCGAGCAG
CAGCTGCAGT CCGGCACGCC CGGCCACCGG GCCAAGCCCC GGGTATTGAT CGGCGATGTG
GTCGGCGAGG TGGTCTGCGC CACCGATGAG GGCGACGCCG ATCTGCTGGT GGTCGGTGCC
CACGGTCGGC AGTACGTCCG CGACTGGATG CTCGGGACCA CCGCCGAGCA GCTGGTCTGC
CACGCCCGGA CGCCGACGCT GGTGGTCCGC CGCGATTCCG ATGCGCCGTA TCGGCGCGTG
GTCGTGGGGG TGGACTTCTC CGAGTGCTCG CGGGCTGCGC TGCAGATCGC CCGGCGCTGG
TTCCCGGCCG CCGAACTCTA CCTGCTCTAT GTGGTGGACA CCGCCGAACT CGATCGCATG
CGCGCTGCCG GCATCGGTGA CAGCTACATT CAGGAGCAGC AGACGCGCTG GATGGAGGAG
GCGCGCACGG AACTGGAGGA GTTTGCCCGG GACGAGGAGC TGAGCCCGGA CGAGGTCCAC
TTGGAGGTGC ACGCTGGCTA TCCGGCCACC GTCCTGCTCG AGGCCCTCGG CGGGCTGGGC
GCGGACCTGG TGGTGATGGG CAACCACGGC CGCGGTCGCT GGGCCAATAT GCTGCTCGGC
AGTGTCGCCT CGCGGCTGCT GCGCGAGCTG TCCACGGACC TGCTGCTGGT TCGCGACGAC
GCCCCGGGGG TCGAGGGTTG A
 
Protein sequence
MHRTLPVDGI KGAAMSMQKV VFASDLSERA GRAGRRAVQL AEAHDAQLEA VHVIETDSPG 
LRALSGSPDR EGVFQAAAEQ QLQSGTPGHR AKPRVLIGDV VGEVVCATDE GDADLLVVGA
HGRQYVRDWM LGTTAEQLVC HARTPTLVVR RDSDAPYRRV VVGVDFSECS RAALQIARRW
FPAAELYLLY VVDTAELDRM RAAGIGDSYI QEQQTRWMEE ARTELEEFAR DEELSPDEVH
LEVHAGYPAT VLLEALGGLG ADLVVMGNHG RGRWANMLLG SVASRLLREL STDLLLVRDD
APGVEG