Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0267 |
Symbol | |
ID | 4711151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 305740 |
End bp | 306660 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639854727 |
Product | UspA domain-containing protein |
Protein accession | YP_001001863 |
Protein GI | 121997076 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACCGTA CTCTTCCGGT TGATGGGATC AAGGGGGCCG CCATGAGCAT GCAGAAAGTC GTCTTCGCCA GCGATCTGTC CGAGCGCGCC GGACGGGCCG GGCGCCGCGC CGTGCAGCTG GCCGAGGCCC ACGATGCGCA GTTGGAGGCG GTCCACGTGA TCGAGACCGA CTCGCCCGGG TTGCGTGCGC TCAGTGGCTC GCCGGACCGG GAAGGCGTCT TCCAGGCCGC CGCCGAGCAG CAGCTGCAGT CCGGCACGCC CGGCCACCGG GCCAAGCCCC GGGTATTGAT CGGCGATGTG GTCGGCGAGG TGGTCTGCGC CACCGATGAG GGCGACGCCG ATCTGCTGGT GGTCGGTGCC CACGGTCGGC AGTACGTCCG CGACTGGATG CTCGGGACCA CCGCCGAGCA GCTGGTCTGC CACGCCCGGA CGCCGACGCT GGTGGTCCGC CGCGATTCCG ATGCGCCGTA TCGGCGCGTG GTCGTGGGGG TGGACTTCTC CGAGTGCTCG CGGGCTGCGC TGCAGATCGC CCGGCGCTGG TTCCCGGCCG CCGAACTCTA CCTGCTCTAT GTGGTGGACA CCGCCGAACT CGATCGCATG CGCGCTGCCG GCATCGGTGA CAGCTACATT CAGGAGCAGC AGACGCGCTG GATGGAGGAG GCGCGCACGG AACTGGAGGA GTTTGCCCGG GACGAGGAGC TGAGCCCGGA CGAGGTCCAC TTGGAGGTGC ACGCTGGCTA TCCGGCCACC GTCCTGCTCG AGGCCCTCGG CGGGCTGGGC GCGGACCTGG TGGTGATGGG CAACCACGGC CGCGGTCGCT GGGCCAATAT GCTGCTCGGC AGTGTCGCCT CGCGGCTGCT GCGCGAGCTG TCCACGGACC TGCTGCTGGT TCGCGACGAC GCCCCGGGGG TCGAGGGTTG A
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Protein sequence | MHRTLPVDGI KGAAMSMQKV VFASDLSERA GRAGRRAVQL AEAHDAQLEA VHVIETDSPG LRALSGSPDR EGVFQAAAEQ QLQSGTPGHR AKPRVLIGDV VGEVVCATDE GDADLLVVGA HGRQYVRDWM LGTTAEQLVC HARTPTLVVR RDSDAPYRRV VVGVDFSECS RAALQIARRW FPAAELYLLY VVDTAELDRM RAAGIGDSYI QEQQTRWMEE ARTELEEFAR DEELSPDEVH LEVHAGYPAT VLLEALGGLG ADLVVMGNHG RGRWANMLLG SVASRLLREL STDLLLVRDD APGVEG
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