| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0240 |
|---|
| Symbol | |
|---|
| ID | 4711094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 276220 |
|---|
| End bp | 277155 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639854700 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001001836 |
|---|
| Protein GI | 121997049 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01288] ATP-binding ABC transporter family nodulation protein NodI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0491819 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAACG AATCCGACCG CGCCGATGGC CCGGCGGTCC GGGCCGTCGG CCTGCTCAAG
CGCTACGGCG GGACTACGGT GGTCGACGGC ATCGATCTGC ACGTCCCCCG GGGCGAATGC
TTCGGGCTGC TCGGGCCCAA CGGCGCCGGC AAGACCACCA CGCTGCGCAT GATCCTCGGG
GTTACGCCGC CGGACGGCGG CACCCTGGAG GTCCTCGGCG AGCCGGTACC GGCCCGCGCC
CGAGCGATGC GCGCGCGCAT GGGGGTGGTG CCGCAGATCG ACAACCTGGA TCCGGACTTC
ACCGTCCGCG AGAACCTCTT CACCTACGCC AGCTACCACG GCCTCAGCCG CGAGGCGGGG
CGGCCGCGGG TGGAGGAGCT GCTGGCGTTC GCCGCGCTGG AGGGCAAGGC CGAGGCGCCC
ATCGCCTCGC TCAGCGGCGG CATGAAGCGC CGCCTGACCC TGGCCCGGGC GCTGGTCAAC
GATCCGGATC TGGTGGTCCT CGACGAACCC TCCACCGGGC TCGACCCCCA GGCGCGGCAG
AACATCTGGC AGAAGCTGCG GGCGCTGCAG AAGCAGGGGC GCACCCTGGT GATCACCACC
CACTACATGG AGGAGGCCGA GCGCCTCTGC GACCGGCTGG CGATCATGGA CCACGGCCGG
ATCATCGACT GCGACAGCCC GGCGGCGCTG GCGCGCAGCC ATCTGGAGCG CTACGTGGTG
GAGCTGCGCG GCGACGAGGC GCGGACCTGG CTCGGCCAGT CCGGGCTCTC CGGGGCGGCG
CGGGTGCGCG AGGTGGGCGA GACGGTACTG CTCTACGCCG ACGACCCGGC GCCGGTGGCC
AGCGCCCTGC AGGCCCAGGG GCTGACCTAC CTGCAGCGTC CGACCAACCT CGAGGACGTC
TTCCTCCACC TCACCGGCCA CGAACTGCGG GAGTGA
|
|---|
| Protein sequence | MVNESDRADG PAVRAVGLLK RYGGTTVVDG IDLHVPRGEC FGLLGPNGAG KTTTLRMILG
VTPPDGGTLE VLGEPVPARA RAMRARMGVV PQIDNLDPDF TVRENLFTYA SYHGLSREAG
RPRVEELLAF AALEGKAEAP IASLSGGMKR RLTLARALVN DPDLVVLDEP STGLDPQARQ
NIWQKLRALQ KQGRTLVITT HYMEEAERLC DRLAIMDHGR IIDCDSPAAL ARSHLERYVV
ELRGDEARTW LGQSGLSGAA RVREVGETVL LYADDPAPVA SALQAQGLTY LQRPTNLEDV
FLHLTGHELR E
|
|---|
| |