| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0212 |
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| Symbol | |
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| ID | 4710932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 244916 |
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| End bp | 246103 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639854671 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_001001808 |
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| Protein GI | 121997021 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.740075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACGCC CCCCCCGCTG GCCGATCCTC ATGGCGGTGT GCCTGACCGC CCCCGCCCTC
GCCGACGACT TCGAGCAATG CGTCAGCAGT CTTCGTGACG ACCTCAAGGA GCAGGGCCGC
GACGCGGCCG TGGTCGAGGA AACCTTCGCC GGGGTCGAGC AGCTCGAGCG CATCCTCGAG
CTCGACCGCG AGCAGCCGGA GTTCGTACAG ACCTTCCGCG ACTACCTCGA CGCCCGGCTC
ACCGAGGAGC GCGTCGACCG CGGCCGGGAG ATGATGGCCG AACACCGCGA GCTGCTCTGG
CAGATCCACG ACGATTTCGG CGTCCCGCCG CGCTACCTGG TGGCCCTGTG GGGCATGGAG
ACCCACTACG GCAGCTACTT CGGCGAGGTG CCGATCATCG ACGCCATGAC CACCCTCGCC
TGCGAGGGCC GTCGGGCGCG CTTCTTCTTC CACCAGCTGG ACGCCACGGT GGCCCTCCTC
GAAGACGGCA AGCTCGAGCG CGACGGCCTG CGCGGCTCCT GGGCCGGCGC CCTGGGGCAC
ACCCAGTTCA TGCCCGCCAC CCTGCGCGAG CACGCTGTGG ACTACGACGG CTCGGGGCGC
ATCGATCTAC GCGACAGCGT GGCCGATGCC CTAGCCTCCG GGGCCAACTA CCTGCGCGCC
ATGGGCTGGC AGCCGGGCCT GCGCTGGGGC CGTGAAGTCC GCCTTGAAGA CGACTTCGAT
TTCGATCACC TGGGCCTGGA CGACCCCCGG GCGCTGGACG AGTGGCAGCA GCTGGGCGTG
CGCCGGGCGG ACGGCTCCGA TCTGCCTCAG AGCGATATCC AGGCCGCGCT GCTGCTACCC
ATGGGCCGCA ACGGCCCGGC GTTCCTGGTC TACGAGAACT TCCGCCGGAT CATGGGCTGG
AACGCCTCGG TCTCCTACGC GCTCTCCGTG GGGCTGCTGG CCGACCGGCT CGACGGCGCC
CCGCCGCTTC GCGCGGGCTT CCCCGATGAC CCGGCCCCGC GCCGCAGCGA GCTGCGCCAG
GCCCAGGAGG TACTCAACGA GCTGGGCTTC GACGCCGGCA CCCCCGACGG CCTGCTGGGG
CCACGGACCC GCGCAGCGCT GCGCGCCTAC CAGCAGGACC AGGGGCTACC GGCCGACGGC
TATCCGGACC CAAAGATCCT CGAACGACTC CAGGAGAAGG CGGAATGA
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| Protein sequence | MPRPPRWPIL MAVCLTAPAL ADDFEQCVSS LRDDLKEQGR DAAVVEETFA GVEQLERILE
LDREQPEFVQ TFRDYLDARL TEERVDRGRE MMAEHRELLW QIHDDFGVPP RYLVALWGME
THYGSYFGEV PIIDAMTTLA CEGRRARFFF HQLDATVALL EDGKLERDGL RGSWAGALGH
TQFMPATLRE HAVDYDGSGR IDLRDSVADA LASGANYLRA MGWQPGLRWG REVRLEDDFD
FDHLGLDDPR ALDEWQQLGV RRADGSDLPQ SDIQAALLLP MGRNGPAFLV YENFRRIMGW
NASVSYALSV GLLADRLDGA PPLRAGFPDD PAPRRSELRQ AQEVLNELGF DAGTPDGLLG
PRTRAALRAY QQDQGLPADG YPDPKILERL QEKAE
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