| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0162 |
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| Symbol | |
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| ID | 4710814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 188287 |
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| End bp | 189783 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639854620 |
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| Product | ImpA domain-containing protein |
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| Protein accession | YP_001001758 |
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| Protein GI | 121996971 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03362] type VI secretion-associated protein, VC_A0119 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.483237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGAGG AGTGCCATCC CGATGCGACG GACCACCCGC TGGGGCTGCC GGGGCGTGTC
CTTGCCGCCC TGGACGGGGA TGCGGACGTA GGCGCCGATC CACGCCACGG TGAGCGGTTC
GCTCGCCTGC GCGAGGCGGT CCAGCGGCTG GGCGGGGCGG ATTTCGCCCA GGTCGCCGAG
GACGCGGCGG TCCTGCTGGA GCAGGAGGCC AAGGATCTCC GCGTGCTTGG TTACCTGTGC
CTGGCCGAGC TCCAGGAGCG TGGACTCGAG GGGTTTCGCG CGGCGCTGGC GGCACTGCAC
GGCGCTCTGG CCGCGTTCGG CGAGCGGATC CATCCGCAGC GGGACGGTGG CCGGCGGGCG
GCCATCGAGT GGCTGTCGGA GAGGCGCATG CTGGCCCTGC TCGATCGGGC GGCCGGCCGC
GATGATCCCG AGCAGCTGCG CGCCCTGGAA GCGGAGCTCG ACCGGCTGGG CGCGGAGCTG
GAGCGGTTGT GGTCGGACCC GCCGGGGCTG CGGCCGCTGC GCAACTGGGT GCAGGAACGG
CAGACCGCCG TTGCCGTGGC CACCGAGCGG ACTGCGCCTA CGCAGCCCGG CGCGCGGGAG
GATGACCGTT CGCCGGGTCC GCCGCGAAGT GGCCAGGAGC TGGGACGGCG GCTGCGCGAG
GCGCTGGATT TCCTGCGCAG CGAGGGCGAG TGGCTGGCGA TGACCGCGCT GGCTCGCGCC
TGGCGCTGGG GGCGGCTTGG ACCGCTGAGC GCCGACGATG GTCGGCTGCG CATCGAGCCA
CCGCGCCAGG TGGCGCTGAC CGCGATACGA AGGCACGTCG ATGAAGGCGC CTGGGAAGCG
GCCTACCTGG CCGCCGAATC GGCCTTCCTG GAGCCGGGCG GGCACCTCCA GCTGGAGATC
CAGGCCGTCG CTGAACGGTC GGCGACGGCG ATGGGGCGAG ACGATATCGC TGCGTACATC
CGTGCGGCAG CGGCGGAGTT GCTACAGCGC CACCCGGCGT TGCCGGATCT GCGCTTCAGT
GATGGCAGCC CATTGGTCCC CCCGGGACAG GTCGCCTGGG TGGCCGATCG CGTGGGAACG
GGTGACGAAT CGCCATGGCG GGAGGAGGGT GAGACCCCGG TGCAACTCGG TGAGGCGCTG
GCGTTGATGC GCAGCGAAGG ACTGGCAGCC GCGCTGCGGC AAATCGATGC CACGCCGCAG
CGCAGCGGTC GCGAGCGCTG CGCCCAGGAG CTGGTTCGGG CGCGCCTCTG CCTGGATGCC
GGCTATCCCG AGCTGGCCCG GGCGCGCCTT GAGCTGCTGG CGGCGGAGAT CGAACGCCGG
GGGTTGGACG AGTGGGATCC GGAATCAACG CTGGCGGTTT GGCGGGAACT GGCGCTGGCA
CTGCAAGCCA GCGAGCGCGA CGGTCAGCTC GATCGCGAGC AGGTGGCTCG GCGCCTGCTC
GCACTGCGCC ACCGGGTGGC GCGTGCCGAT CTGGAGGCGG CGATCGCCTT CCCCTGA
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| Protein sequence | MTEECHPDAT DHPLGLPGRV LAALDGDADV GADPRHGERF ARLREAVQRL GGADFAQVAE
DAAVLLEQEA KDLRVLGYLC LAELQERGLE GFRAALAALH GALAAFGERI HPQRDGGRRA
AIEWLSERRM LALLDRAAGR DDPEQLRALE AELDRLGAEL ERLWSDPPGL RPLRNWVQER
QTAVAVATER TAPTQPGARE DDRSPGPPRS GQELGRRLRE ALDFLRSEGE WLAMTALARA
WRWGRLGPLS ADDGRLRIEP PRQVALTAIR RHVDEGAWEA AYLAAESAFL EPGGHLQLEI
QAVAERSATA MGRDDIAAYI RAAAAELLQR HPALPDLRFS DGSPLVPPGQ VAWVADRVGT
GDESPWREEG ETPVQLGEAL ALMRSEGLAA ALRQIDATPQ RSGRERCAQE LVRARLCLDA
GYPELARARL ELLAAEIERR GLDEWDPEST LAVWRELALA LQASERDGQL DREQVARRLL
ALRHRVARAD LEAAIAFP
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