| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0147 |
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| Symbol | |
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| ID | 4710700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 167453 |
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| End bp | 171034 |
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| Gene Length | 3582 bp |
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| Protein Length | 1193 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639854605 |
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| Product | peptidase S41 |
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| Protein accession | YP_001001743 |
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| Protein GI | 121996956 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAGCG TCATCCCGTT CCTGCTCGTG TTGCTCGCAG GCCTTCTCGG GTTGGTCGGC
CCCTTGACGG TGGCGGCGGC TGACGAGGGT GAAACGGCCG TCGAGCTGCC CCGTTTCCCG
TCCATCAGCC CGGATGGAGA GAAGCTGGTC TTCAGCTGGG GGGGCGACCT CTGGCGGGTC
CCCGCCGAGG GTGGCACAGC GACCCGGCTG ACCGGCCATC GTCTGGACGA TCTCCACTCC
GCCTGGTCCG GCGACGGGGA TACGCTGGTG TTCTCCTCCT TGCGGGACGG TTACCTCAAC
CTCTGGCGCA TGCGGCCGGA CGGGACGGGA CTCAGGCAGG TCACTTACGG CGATCGTTTC
CTGCGCCACC CCGGTTTCGG AGTGGGCCGC GATGGCGAGC CGCTGGTGAC CTTCTCGGCG
CAGCTTGAGG CGGATGTCTA CCGGGACCAG CGCCCCTACG GCGTCGCGCC GGGGGGCGGC
GAGCCGCAGC GCCTGCATGA CGCCTTTGGC TCCGAGCCCA GCACCTCCCC CGATGGGCGA
TACGTAGCCT TCACCCGTGG CGGGGCCTAT CACGGTTGGA GTCGCCGCCA CTACCACGGG
CCCGATGCCC GCGATGTGTG GCTCTACGAC CGCGACGAGG AGGCGTTCTC CCCGTTGACC
CAGCGTCGTG CCGGGGACGA CGGCCAGGCA CAGTGGTTGG ATGAGCGGAC CCTGATCTTC
CTCTCGGACC GTGAGGACAA CACCGTGAAC CTCTTCCGCG CGAGGGTGGA GGGGGCGTCC
GGTGGCGTGG AGCGCCTGAC CCACTTCGAT GAGCGGGATG TACAGGCGTT CGATGTGGCG
CCCGAAGCGG GTCGGGCGGT GTTGCAGGTC TGGGATCGGC TCTACCTTCT CGATCTGGAT
AGGCTCGATG CCGAGCCGGA GCCGGTGGCG TTGCGGGCCG GCGACCCGGG GCACGACCGC
TACGAGCTGC GCTCGGTGGA CCGCCAGGTC AGTGAGGCCG CGCTGAGCCC CGACGGCGAA
GTGATGGCGT ACATCGCCTA CGGCCGGGTC TACGTGCGAC ATATGGATGA GCACAGTCCG
ACTCGCCCCG TGACCCCGGA TACCCACGCC CGTCATCGGG ACCTGCGCTG GTCGCCGGAT
GGTCTGCGGT TGTACTTCAC CCGGGATGCC GACGGCACTG AATCGATCTA CACCGCCGGG
GTGGCCCTGA CCCGCGAGGA GGTACGCCGC GGCTGGGTGG CCTCCGGGGA AACGGGGGGT
GCACCGCGCC CGGCGCGACC CGAGACCGGG GCGGACGCGT CAGAGGGGCA GGAGTCAAGC
GGCGGGGATG GCGCAGCCGC CGACCCGGAC GACCCCTTCG CCCCCACCGA CCCCATCGAG
CCGCCGTCGG ATCCCGACCC CGGCGACCCG GGTCTCGAGC CCGCCCTGAC GGAACCGGAT
ACGCCGCCGG AGCCCGATCC GCAGCCGGCC CCGGACCCGG AGCCCGTGCC GGAGGAAGCC
GATCCGGTGG CACCGGCCGC GGATCCGGAT CGCTGGCACG ACGCCCTGCA GTTCACTCTG
CGTCCTCTGG TGCAGAGCGA GGAGCACGAG CGCGATGCCA GGCCGTCCCC GGACGGTACC
CGGATCGCAT TCCGCCGCGG GCGCGGCGAT CTGGTGGTCC AAGACCTCGA CGGGGGCGGC
GAGCGCACCC TGGTCGAGGG GTGGGACGCC ACAATCGACT GGCGCTGGTC GCCCGACGGC
CGCCACATCG CCTATACGCA GAACGACCTG GATTTCAGCG CCAACGTCTT CATCGTCCCT
GCGGACGGGT CGGCGGAGCC GGTCAACATC ACCCGTCACC CACGCAACGA TCTCAATCCG
CACTGGTCAG CCGACGGTCG GGTGCTGACC TTCATCTCCA ACCGCAGCGG GGATAGCTAC
GATCTCTACC GGGTCTACCT GGATCCGGAG CTGGCGCGTT ACAGCCGCCT GGAGCTTGAC
CGCTACTATC GCCAGGGGCG CGAAGCGGCG GAGCGGCGTG AGCCGCTGCC GGTGCTCACC
CCGGGTGCCA CGGATGTGAC TCGGACGGAG ACGGTGACCC AGGAAGAGCC GCCGGAGCTG
GAGCTCGAGG GTGCTTGGCG GCGCGTGGAG CGAGTCAGCA GCGCGGCCGG CAACGAGTAC
GCGAGCCGGA TGACCCCGGC CGGCGACCGC TACGTCTTCA ATAGCGCCGG CGAGGGGCTG
ATGGTGATGA ACTGGGACGG CAGCGAGCGG CGCCGCCTGG GCCCGGTGGC CGATATCCAG
CATCTGACCC TGCGCGGCGA TCGGGTGGTC TACGTCGCCG GAGGGCGGGC CGGGGTGGTG
CGGCTCGGCG GTGGCGAGCA TCGGCGCCCT GACATCAGCG ACCGGATCCG CATCGACCGA
AAGGCCCAGG GCGTGCAGAA GTTCCGCGAG GCGGCGCGCA TCATCGAAGA GGGGTTCTAT
CGGCCGGACC TCAAGGGCCT GGACTGGGAG GCGCTGGTAT CCGATTACGA GGCCTTGATC
CGCCGGGCGC GGACGGCCAG CGAATTCAGC GACATCGCCA ATCGCCTCAT GGGCGAACTG
GCCGCCTCAC ACACCGGGGT GAGCAATCCC GGCCCCGGGT CGGCCCTGCG CGAGCCCTCC
GGGCGGCTGG GGATTCGACA TGAGCGCGTC GAACTGGCAG ACGGGCGCCC GGGATACCGG
GTCGAGTCGG TGGTTCCCAA CGGGCCGGCG GCCCACGGGC CTATGCCCCT GCAGAGCGGC
GATACCATCG TGGCCATCGA CGGCCGCGGA ATCGACCGCG ATGAGACCCT GCTCCAGCGC
CTGCGGGGCC GGGTCGGTGA TGAGCTGCTC ATCGCCTTCC GTCGGCCCGA ACCGGAGGGG
GACGGCAGGC AGCTTTTGCA CACCCTGGTA ACGCCCGTCG ATTATCGGGG TATGGCCGAG
CTGCGCTACG ACGCGTTCCG GGAGGAGCGG CGCCGGCTGG TGGACGAGCG CTCCGATGGC
CGGCTCGGGT ACATCCATAT CCAGGCGATG AACCAGGCCT CCCTGGAGGC CTTCCAGGGC
AGTCTCTACG CGGCGGCGGA GGGCAAGGAG GGGCTGATCA TCGACGTCCG CAACAACGGC
GGCGGGCATA CCACCGATCG GATCCTCACC TCGATCATGG CGGCCGAGCA CGCCTACACC
ATCCCCGCGG GCGCCGACCC CTCGCGCACT GGTCACTACC CGCAGGACCG CCTGGATGCC
CCGCGCTATA CGCTGCCCAT CAACATGGTG GCCAACGAGA AGAGCTACTC CAACGCCGAG
ATCCTGGCGC ACGCCTTCAA TACCCTCGAA CGGGGCACCC TGGTGGGCGA ACAGACCTAC
GGTGGCGTGA TCTCCACCGG TCGGCACGCC CTGATCGACG GTGCCACCGT GCGCCGTCCC
TTCCGCGGCT GGTATCTGCC GGACGGCACC GACATGGAGC ACCACGGTGC CGAGCCGGAT
ATCCGGGTGC GCCAGCGCCC GGAGGATGAA GTGGCGGGCC GCGATCGGCA GCTCGAGGCG
GCGGTGGACG ACATGCTCGA GCAGCTCGAC GACCGGGAGT GA
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| Protein sequence | MRSVIPFLLV LLAGLLGLVG PLTVAAADEG ETAVELPRFP SISPDGEKLV FSWGGDLWRV
PAEGGTATRL TGHRLDDLHS AWSGDGDTLV FSSLRDGYLN LWRMRPDGTG LRQVTYGDRF
LRHPGFGVGR DGEPLVTFSA QLEADVYRDQ RPYGVAPGGG EPQRLHDAFG SEPSTSPDGR
YVAFTRGGAY HGWSRRHYHG PDARDVWLYD RDEEAFSPLT QRRAGDDGQA QWLDERTLIF
LSDREDNTVN LFRARVEGAS GGVERLTHFD ERDVQAFDVA PEAGRAVLQV WDRLYLLDLD
RLDAEPEPVA LRAGDPGHDR YELRSVDRQV SEAALSPDGE VMAYIAYGRV YVRHMDEHSP
TRPVTPDTHA RHRDLRWSPD GLRLYFTRDA DGTESIYTAG VALTREEVRR GWVASGETGG
APRPARPETG ADASEGQESS GGDGAAADPD DPFAPTDPIE PPSDPDPGDP GLEPALTEPD
TPPEPDPQPA PDPEPVPEEA DPVAPAADPD RWHDALQFTL RPLVQSEEHE RDARPSPDGT
RIAFRRGRGD LVVQDLDGGG ERTLVEGWDA TIDWRWSPDG RHIAYTQNDL DFSANVFIVP
ADGSAEPVNI TRHPRNDLNP HWSADGRVLT FISNRSGDSY DLYRVYLDPE LARYSRLELD
RYYRQGREAA ERREPLPVLT PGATDVTRTE TVTQEEPPEL ELEGAWRRVE RVSSAAGNEY
ASRMTPAGDR YVFNSAGEGL MVMNWDGSER RRLGPVADIQ HLTLRGDRVV YVAGGRAGVV
RLGGGEHRRP DISDRIRIDR KAQGVQKFRE AARIIEEGFY RPDLKGLDWE ALVSDYEALI
RRARTASEFS DIANRLMGEL AASHTGVSNP GPGSALREPS GRLGIRHERV ELADGRPGYR
VESVVPNGPA AHGPMPLQSG DTIVAIDGRG IDRDETLLQR LRGRVGDELL IAFRRPEPEG
DGRQLLHTLV TPVDYRGMAE LRYDAFREER RRLVDERSDG RLGYIHIQAM NQASLEAFQG
SLYAAAEGKE GLIIDVRNNG GGHTTDRILT SIMAAEHAYT IPAGADPSRT GHYPQDRLDA
PRYTLPINMV ANEKSYSNAE ILAHAFNTLE RGTLVGEQTY GGVISTGRHA LIDGATVRRP
FRGWYLPDGT DMEHHGAEPD IRVRQRPEDE VAGRDRQLEA AVDDMLEQLD DRE
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