| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0102 |
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| Symbol | |
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| ID | 4710595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 117829 |
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| End bp | 118836 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639854559 |
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| Product | putative periplasmic protease |
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| Protein accession | YP_001001698 |
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| Protein GI | 121996911 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAACG AATACCTGCT GTTCCTTGCC CAGACCGCCA CGGTGGTACT GGCCATTCTG
CTCGTGCTTA CCGCGGTGGT CCGGCTGCGC CAGGAAGGGG GCAGTGCGCC GGGGCGGCTG
CAGGTGCGTC CGCTCAACGG CGTCTACCGC CAACGGGCGC AGGCCCTGCG TCGTGCCGGT
GAGCAGGCCT CCTGGCGCGG CCGGGTGCGC AAGACGCTGC GGCGCCAGGC GTCGGAGACG
CCGCCTGCGG AGTTGCCGGA CAAGCGGATC TACGTCCTGG AGTTCCGCGG CGATATCCGG
GCGCGCGCTG TGGAAGGGCT TCGGGAGGAG ATCACGGCGG TCATTGCCGC GGCCCGCCCT
GGGCAGGACG AGGTCATCCT GCGTCTGGAG AGCCCCGGCG GGGGCGTGCC CGCGTACGGA
CTGGCGGCCT CGCAACTGGC GCGCCTGCGT GAGGCGGGGA TCCATCTGAC AGTATGCGTT
GACCGCGTGG CCGCCAGCGG CGGTTATCTC ATGGCGGTGG TCGGGGATCG GATCGTGGCG
GCCCCCTTCG CGCTGATCGG ATCCATCGGC GTGGTCGGGA GCCTGCCCAA CTTCCACCGC
TGGTTGCGCA ACCGCGACAT CGATTTCGAG CAGCACACGG CGGGTCCCTA CAAGCGGACC
CTGACAGTCT TCGGGGAGAA CACCGAGGCG GATCGAGAGC GCTTTCGCGA GGACCTGGGC
CATATCCACG AGCAGTTCAA GGGATTCCTG CGGCGCTACC GTCCGCAGCT GGATGTCGAG
ACGGTGGCAA CCGGGGAGTT CTGGCTGGCT GAGCGAGCCC TGGAAGCGGG GCTGATCGAC
GCCCTGCAGA CCAGCGACGA CTGCATCATG GCCCAGCGCG AGCAGGCGCA CCTGCTGGAG
GTCGATTATC GTCAGCGGGA GGGCTGGTCC CAGCGCCTGA CCCAGGTCAC CGAGCGGTTG
CTGGGGCAGC GCAGCGGCAT CGACCGGCTG GGGCCAGATC TGGAGTAA
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| Protein sequence | MLNEYLLFLA QTATVVLAIL LVLTAVVRLR QEGGSAPGRL QVRPLNGVYR QRAQALRRAG
EQASWRGRVR KTLRRQASET PPAELPDKRI YVLEFRGDIR ARAVEGLREE ITAVIAAARP
GQDEVILRLE SPGGGVPAYG LAASQLARLR EAGIHLTVCV DRVAASGGYL MAVVGDRIVA
APFALIGSIG VVGSLPNFHR WLRNRDIDFE QHTAGPYKRT LTVFGENTEA DRERFREDLG
HIHEQFKGFL RRYRPQLDVE TVATGEFWLA ERALEAGLID ALQTSDDCIM AQREQAHLLE
VDYRQREGWS QRLTQVTERL LGQRSGIDRL GPDLE
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