Gene Hhal_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0088 
Symbol 
ID4710542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp102396 
End bp103454 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content69% 
IMG OID639854546 
ProductUDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 
Protein accessionYP_001001685 
Protein GI121996898 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGCG CCATGACAGT CCAGGAACTC GCCGCGCGGC TGGGCGCACG GCTCGCGGGT 
GACGGGGAGC GGCCAGTCTG TCGTGCTGCC ACCTTGCTCG GGGCTGGCGG CGATGCTGTG 
TCCTTTTGCA CCAGCAAGCG GCATCTGCCC GAGTTGCGCC GCAGCGGCGC TGCCGCCGTT 
TTGGTGCGCG CCGAGCACGA GGGCGATTGT CCGGGCACCG CGCTGGTGGT CGAGGATCCT 
TATCTGGCCT TCATCGAGGT GGTGGAGCTC CTGCATCCTG AACCGTCGGC GCCGCCGGGG 
ATCCACCCCG GGGCTGTCGT AGCCTCCGAT GTGGTGTTGG GCGACGGGGT CAGTGTCGGT 
GCCAATGCGG TTATCGAAGC CGGCGTCGAA CTCGGCGCCG GGAGCACGGT GGCGCCGGGC 
GCCTTCATCG GCCCCGGTGC GCGCCTGGGC ACGGGCAGCT GGTTGGGTCC CAATGCCGTG 
CTGGCCGGGG GCTGTCGGAC CGGCGAGCGG GTGCGCATCC ACGCCGGTGC GGTCATCGGT 
GCCGACGGCT TCGGCTACGC CCCGTTGCCC GATGGACAGG GGTGGCGCAA GGTCCCGCAG 
ATCGGTGGGG TCGATATCGG TGACGACGTC GAGATCGGCG CCAATGCTAC GGTTGACCGC 
GGGGCGCTTG AGGACACGGT CATCGAGGCC GGGGTCAAGC TCGATGACCA TGTTCACATC 
GCCCACAACT GTCGTGTGGG TGCCCGCACC GTCATCGCTG GGGGCACCCT GGTGGCGGGC 
AGTACCACCA TTGGCCGGGA CTGCCTGATC GGCGGACTGG TGGCGATTAC CGATCACATC 
CGCATCGCCG ACGGCGTCTC CCTGATGGGG ATGACCGGTG TGACGGGCTC TATCCGGGAA 
TCCGGTGCCT ATGCCTCGCC ACTGCCGGCC CAGCCAGTCC GGCAGTGGCG GCGCAATACC 
GTCCGCTTCA CCCAGCTCGA GGGCCTCTTC CGCCGTGTCC AGGCCCTGGA AACCGGGCAC 
GGTATGGTCG GCGACGCGGG CGAGGAGCGC GATGACTGA
 
Protein sequence
MTSAMTVQEL AARLGARLAG DGERPVCRAA TLLGAGGDAV SFCTSKRHLP ELRRSGAAAV 
LVRAEHEGDC PGTALVVEDP YLAFIEVVEL LHPEPSAPPG IHPGAVVASD VVLGDGVSVG 
ANAVIEAGVE LGAGSTVAPG AFIGPGARLG TGSWLGPNAV LAGGCRTGER VRIHAGAVIG 
ADGFGYAPLP DGQGWRKVPQ IGGVDIGDDV EIGANATVDR GALEDTVIEA GVKLDDHVHI 
AHNCRVGART VIAGGTLVAG STTIGRDCLI GGLVAITDHI RIADGVSLMG MTGVTGSIRE 
SGAYASPLPA QPVRQWRRNT VRFTQLEGLF RRVQALETGH GMVGDAGEER DD