Gene Hhal_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0087 
Symbol 
ID4710541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp101376 
End bp102353 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content69% 
IMG OID639854545 
Productalcohol dehydrogenase 
Protein accessionYP_001001684 
Protein GI121996897 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGCCC TGCGACTCGA GGCGCCGGGG CAAATGCGGA TCGTGGAGCA GGCGCCGCCG 
GTCGGGACGG CAGATGCGCC TGTCCAGCGG GTGCTGAGCG CTGCACTCTG CCGGACCGAT
GCGCGCATGT GGCAGTGTGG GCACCGGGAT CTGATCCTGC CGCGGGTTTT GGGGCATGAG
CTGTGTGTCC TGGGCGAGGA TGGACACCGG TATGCCGTTT GGCCCGGGGT GAGCTGTGGG
CGCTGCCCGG CTTGCCACTC GGGTGTCGAG AATCTCTGCC TCGGTGTGGA GGTCCTCGGC
TTCCATCGAG ATGGTGGGAT GGCTCAATGG GTGCAGGTGC CGCGGGAGAG CCTGATCCCG
GTCCCTTCGG AGGTCCCGGA TGTTGTCGCT TGCCTGGCAG AGCCCCTGGC CTGCGGGATC
AACGCCCTGA ACCAGGCCCG CGTCGAAGCG GGCGAGCGGG TGCTGATCCA CGGCGCCGGG
CCGGTGGGCC TGTTGCTGGC ACTGGCAGTA CAAGCGCGGG GGGCGGAGCC GCTGGTCTGC
GAGACCGCCG CCGACAAGGC GGCACTCAGC GCCCGGTTCC GGACGCTCAG TGGGGTGGTA
CTCACACTGG AGGCGCCCGG GGATGGGTGG GATGTGGCTA TCAACGCGAC ATCCGCGCCG
CCGGCCCTGT CTGCAGGGCT TCAGCGGTTG CGGCCCGGTG GTCGGTACGT CGTGTTCAGC
GGGCTGAGGC AGGAGGCGGA AATCGATCTC GGTGCGGCCT TCAACGGGAT CCATTATCGG
CAGCTTCAGG TGGTCGGCGC CTACGGTTGT ACGCGCAGCG GGATTGCCGA TGCGGTGGCG
CTGCTTGGTC GGTACCCCGA TGCAGCGGAG GCGCTGGTCG AGGCGGTGAT CCCGCTGGAG
GACAGTCCGC TTGCCCTGCG CCGAGTGGCC GAGGGCGGTG TGCTGCGCTT CGTGGTACGC
CCCGACGGGT TAGGGTGA
 
Protein sequence
MRALRLEAPG QMRIVEQAPP VGTADAPVQR VLSAALCRTD ARMWQCGHRD LILPRVLGHE 
LCVLGEDGHR YAVWPGVSCG RCPACHSGVE NLCLGVEVLG FHRDGGMAQW VQVPRESLIP
VPSEVPDVVA CLAEPLACGI NALNQARVEA GERVLIHGAG PVGLLLALAV QARGAEPLVC
ETAADKAALS ARFRTLSGVV LTLEAPGDGW DVAINATSAP PALSAGLQRL RPGGRYVVFS
GLRQEAEIDL GAAFNGIHYR QLQVVGAYGC TRSGIADAVA LLGRYPDAAE ALVEAVIPLE
DSPLALRRVA EGGVLRFVVR PDGLG