Gene Hhal_0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0085 
Symbol 
ID4710516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp99698 
End bp100210 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content64% 
IMG OID639854543 
Productperiplasmic protein thiol--disulphide oxidoreductase DsbE 
Protein accessionYP_001001682 
Protein GI121996895 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID[TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAAAC GCATCCTGAT CCCGCTGGCC ATCGCGGTCC CCGTGCTGGG GCTGCTTTAC 
GTCGGCCTGG GGATGGACTC GAGAGAGCTG CCGTCGCCGC TGGTCGGTGA ACCGGCGCCG
GCCTTTGAGC TGGAAGACCT CGACAACTCC GGAGAGACCC TCACCCACGA GGACTTCACG
GGTGATGTCG CTGTCGTCCA TGTGTGGAGT TCCACCTGCC CGGTCTGCCA TGAGGATTTC
CCCCACCTGG AGCGCCTCTC CGAGCACGGG GTCCAGGTCT ACGCCTTCAA CTATCGGGAC
GACCGCGCGC AGGCGCAGCG GTATCTCCAG GTGCGTGGCA ACCCGTACGA TCGCATTGCC
CACGACCCCG AAGGCGAGGC CGGCATGGAG TGGGGCGTTT ACGCCACGCC CGAGACCTAT
GTACTGGATA AAGACGGGAC CATCACCTAC AAGGAGATCG GCCCCCTGGA TGAAGAGGTG
GTCGAGGAGG AGATCCTCTC GCTGGTGGAC TAG
 
Protein sequence
MLKRILIPLA IAVPVLGLLY VGLGMDSREL PSPLVGEPAP AFELEDLDNS GETLTHEDFT 
GDVAVVHVWS STCPVCHEDF PHLERLSEHG VQVYAFNYRD DRAQAQRYLQ VRGNPYDRIA
HDPEGEAGME WGVYATPETY VLDKDGTITY KEIGPLDEEV VEEEILSLVD