Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0085 |
Symbol | |
ID | 4710516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 99698 |
End bp | 100210 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639854543 |
Product | periplasmic protein thiol--disulphide oxidoreductase DsbE |
Protein accession | YP_001001682 |
Protein GI | 121996895 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCAAAC GCATCCTGAT CCCGCTGGCC ATCGCGGTCC CCGTGCTGGG GCTGCTTTAC GTCGGCCTGG GGATGGACTC GAGAGAGCTG CCGTCGCCGC TGGTCGGTGA ACCGGCGCCG GCCTTTGAGC TGGAAGACCT CGACAACTCC GGAGAGACCC TCACCCACGA GGACTTCACG GGTGATGTCG CTGTCGTCCA TGTGTGGAGT TCCACCTGCC CGGTCTGCCA TGAGGATTTC CCCCACCTGG AGCGCCTCTC CGAGCACGGG GTCCAGGTCT ACGCCTTCAA CTATCGGGAC GACCGCGCGC AGGCGCAGCG GTATCTCCAG GTGCGTGGCA ACCCGTACGA TCGCATTGCC CACGACCCCG AAGGCGAGGC CGGCATGGAG TGGGGCGTTT ACGCCACGCC CGAGACCTAT GTACTGGATA AAGACGGGAC CATCACCTAC AAGGAGATCG GCCCCCTGGA TGAAGAGGTG GTCGAGGAGG AGATCCTCTC GCTGGTGGAC TAG
|
Protein sequence | MLKRILIPLA IAVPVLGLLY VGLGMDSREL PSPLVGEPAP AFELEDLDNS GETLTHEDFT GDVAVVHVWS STCPVCHEDF PHLERLSEHG VQVYAFNYRD DRAQAQRYLQ VRGNPYDRIA HDPEGEAGME WGVYATPETY VLDKDGTITY KEIGPLDEEV VEEEILSLVD
|
| |