Gene Hhal_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0084 
Symbol 
ID4710535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp97972 
End bp99594 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content67% 
IMG OID639854542 
Producthypothetical protein 
Protein accessionYP_001001681 
Protein GI121996894 
COG category[S] Function unknown 
COG ID[COG4425] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.42899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTGA TCGGCCCCCT GTCCACTGTC GGCCTGCTAC TCGGCACGCT CTTCTTCGCC 
TTCTCGCTCA CGCCGAGCCT GGTTCCCAGG CCTTTCGCCT TTCAGGGCGT CCTCTCCGGC
CTCTCGCTGA CCGCCGGATA CGCCATCGGT GCGGGGCTGA GCACACTGTG GCATTACCTT
CAGCTACCGG AACTGCGTGG ACGGCTCGAG CGGATCGTGC GCTGGCTGGC CGTAGCCGGC
TGCGCCCTGG TTGCGGTGAT CTTCATGTGG CGAGCTGCGG GCTGGCAGGA TGCGGTGCGC
GCGCAGATGG AACTGGAACC GGCCGGCGGA CTGCCGCCAG TCGGTGCTGC CCTGGTCGCC
CTGTTGGTCT TTGCGGCCGC TCTACTTCTG GCGCGACTCT TTCGGGGAAC CTTCCGCTTC
CTCTCGCTGC GCCTGCAGCG TTACATCCCG CCGCGGGTGT CGCACCTGGC GGGGATCGTC
GTCGCGGTCG GCCTGTTCTG GGCTGTGATC GACGGCGTGC TGTTCACCAT GGCCCTGCGT
GCCGCCGACA GCTCCTATCA GCAGGTGGAC GCCCTGATCG AGGCCGATCA GGAGCGCCCG
AGCGAACCCG AGCGCGCCGG CAGCCCCGAC TCGGTGGTCG CCTGGCGAGA TCTCGGACGC
CAAGGGCGAA GCTTCGTCTC CTCCGGGCCC ACAGCCACGG AACTGAAGGC GTTCCTCGGC
GAGCCGGCGC CGACACCGAT CCGCATCTAC ATCGGCCTGA ACGCCGCCGA GACGCCGGAA
GAGCGCGCCC AGCTCGCCAT GGACGAACTC CACCGCACCG ACGCCTTCGA CCGCTCGGTA
CTGGTCCTCG CCACTCCCAC TGGCACCGGG TGGATCGACC CTGCGGCGGC CGACCCAGTG
GAGTATCTCC ATCGCGGGGA CATCGCCACG GTGACCGCTC AATACTCGTA TCTGCCCAGT
CCTCTGGCGC TGATGGTCGA AGGCAGCTAT GGGGCCGAGA TGGCCCGAGC CCTGTTCGAG
GCGGTCTACG GCCACTGGCA GACCCTGCCC GAGGACGAGC GTCCGGCTCT CTACCTGCAC
GGCCTGAGTC TCGGGGCCCT GAACTCGGAT CGGGCCTTTG ATGTCTTCGA CATCATCCAA
GACCCCTTCG ATGGCGCGCT ATGGAGTGGC CCCCCATTCC GCAGTGAGAC CTGGCGGACC
GTCACCCAAC GCCGTGATGC CGGATCCCCT GCCTGGCTGC CGGAATTCCG CGAAGGCGAG
GTGGTGCGCT TCATGAATCA AGAGACCGGC CTCGACGCTG CCAACGGCGA CTGGGGTACG
TTCCGGCTCG CCTTCCTGCA GTACGCCAGC GATCCCATCA CGTTCTTCAG CCCGAGCATC
CTCTACCGGG AGCCGGACTG GATGGCCGAG CCACGGGGCC CTGACGTCAC CTCGGAACTG
CGCTGGTACC CGGTCGTGAC CATGCTGCAG CTGGCTGCCG ACATGGCGGC TGGCGGCGCT
CCGCCCGGGT ACGGCCACAC CTACGCCGCG GAGGACTACA TCGACGCCTG GGTTGCGCTG
ACCGAACCAG ACGACTGGAG CCGCGACGAC CTAAAGCGGC TACGCCAGGC GTTCAGACGC
TGA
 
Protein sequence
MRLIGPLSTV GLLLGTLFFA FSLTPSLVPR PFAFQGVLSG LSLTAGYAIG AGLSTLWHYL 
QLPELRGRLE RIVRWLAVAG CALVAVIFMW RAAGWQDAVR AQMELEPAGG LPPVGAALVA
LLVFAAALLL ARLFRGTFRF LSLRLQRYIP PRVSHLAGIV VAVGLFWAVI DGVLFTMALR
AADSSYQQVD ALIEADQERP SEPERAGSPD SVVAWRDLGR QGRSFVSSGP TATELKAFLG
EPAPTPIRIY IGLNAAETPE ERAQLAMDEL HRTDAFDRSV LVLATPTGTG WIDPAAADPV
EYLHRGDIAT VTAQYSYLPS PLALMVEGSY GAEMARALFE AVYGHWQTLP EDERPALYLH
GLSLGALNSD RAFDVFDIIQ DPFDGALWSG PPFRSETWRT VTQRRDAGSP AWLPEFREGE
VVRFMNQETG LDAANGDWGT FRLAFLQYAS DPITFFSPSI LYREPDWMAE PRGPDVTSEL
RWYPVVTMLQ LAADMAAGGA PPGYGHTYAA EDYIDAWVAL TEPDDWSRDD LKRLRQAFRR