Gene Hhal_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0083 
Symbol 
ID4710534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp97322 
End bp97759 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content66% 
IMG OID639854541 
Producthypothetical protein 
Protein accessionYP_001001680 
Protein GI121996893 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1585] Membrane protein implicated in regulation of membrane protease activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0908948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGATC CATCCTGGGT GTGGCTGGCC AGCGGAATCC TGCTGCTGGT GGCCGCAGCG 
ATCTTCGGTG GCCACCTGTT CCTGCTGGAC CTGGCTGTGG CTGCCTTCGT GCTGGCCTTG 
GTGACGTCGA TGAAGACAGA TCTGGCCGTC TCCCATCAGG TTTTGATCTA TCTCCTTACG 
ACGCTACTCC TCCTGCCGGC GGGTTACCGC CTGGCACAGC GGTTCGCTGG CGCCTACGCC 
CATCGCATGG TGGCTCCGGC CGATGCCTAT GCCGGGCGGT ACGGGGTCCT GGTCCAGCGG 
GGGCGAGGGG TCGGTGTACT GGTGGATGAC GAGGTTTTTC CGGCTCGCGG GGCGGAGGGG 
CAGGAGCTGC GGCCGGGTGA TCGAGTGCGG ATCGAGCGGA TGGTGGGGAT CACGGCGTGG 
GTGCGCCCGG GGAACTGA
 
Protein sequence
MFDPSWVWLA SGILLLVAAA IFGGHLFLLD LAVAAFVLAL VTSMKTDLAV SHQVLIYLLT 
TLLLLPAGYR LAQRFAGAYA HRMVAPADAY AGRYGVLVQR GRGVGVLVDD EVFPARGAEG 
QELRPGDRVR IERMVGITAW VRPGN