Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0062 |
Symbol | |
ID | 4709719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 72594 |
End bp | 73253 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639854520 |
Product | electron transport complex, RnfABCDGE type, E subunit |
Protein accession | YP_001001659 |
Protein GI | 121996872 |
COG category | [C] Energy production and conversion |
COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGCTA AGCGCGAGCA AGAACCGATC ACCATGGACA CCTTCCTCAG TGGTGTCTGG CGGGAGAACC CCGTCTTCGT GATGCTGCTG GGGATGTGCC CGGTGCTGGC CGTGACCAAC ACCACCGAGA ACGCGCTGGC GATGGGGCTT GCGACGACCT TCGTGCTGGT CTGCTCCACC GGCCTGGTCT CCGTCCTGCG CGATTTCATC CCCAAGGAGG TGCGCATTGC CTCCTACATC GTGATCATCG CGAGCTTCGT CACGGTGGTG GATTACGCGA TCCAGGCGAT CAGCCTGGAT ATCTACAATG CCCTCGGGGC GTTCATTCAG TTGATCGTCG CCAACTGCAT GATCCTCGGC CGGGCCGAGG CGTTCGCGTC GCGCAAGCCG CTGGGCAAGA CGCTGGTCGA CGCGCTCGGC GTTGGCGCCG GTTTCACGCT GGCACTGCTC TGTCTCGGTA CCGTGCGTGA ACTCCTCGGG GCGGGGGAGA TCCTGGGCAT CCAGGTCTTC GCCGATCGCT TCGAGCCCTG GGTGATCATG CTGCTGCCGC CGGGGGGGTT CTTCGTGCTC GCCGGCTGGC TGCTGCTCTT TGCCTGGATC AAGGAGCGCC AGAACCAACG CGCCGCTGCC GGTAAGGAGG CGACCGCCGA TGGACGCTGA
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Protein sequence | MAAKREQEPI TMDTFLSGVW RENPVFVMLL GMCPVLAVTN TTENALAMGL ATTFVLVCST GLVSVLRDFI PKEVRIASYI VIIASFVTVV DYAIQAISLD IYNALGAFIQ LIVANCMILG RAEAFASRKP LGKTLVDALG VGAGFTLALL CLGTVRELLG AGEILGIQVF ADRFEPWVIM LLPPGGFFVL AGWLLLFAWI KERQNQRAAA GKEATADGR
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