Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0060 |
Symbol | |
ID | 4710467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 70003 |
End bp | 71352 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639854518 |
Product | glutamate dehydrogenase |
Protein accession | YP_001001657 |
Protein GI | 121996870 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.742683 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCAC GGCTCGACGA GAAACTGGAA CCGATCTATC AGGATGTCGT CCGCCGCAAT CCCGGCGAGA GTGAGTTCCA TCAGGCGGTT CACGAGGTCC TCGAGACCCT CGGTCCGGTG ATGAGCAAGT ATCCGGAGTT CGCAGACCAC AAGATCATTC AGCGGATCTG CGAGCCGGAG CGGCAGATCA TCTTCCGGGT ACCGTGGCAG GACGATAACG GCGAGATCCA CATCAACCGC GCCTTCCGGG TGGAGTTCAA CAGCGCCATG GGCCCCTACA AGGGCGGCAT GCGTTTCCAC CCCTCGGTGT ACCTGGGCAT CATCAAGTTC CTCGGCTTCG AGCAGGTGTT CAAGAACGCC ATCACCGGCA TGCCTATCGG TGGCGGCAAG GGCGGCAGTG ACTTCGACCC GAAAGGCCGC TCGGATGACG AGATCATGCG CTTCTGCCAG AGCCTGATGA CCGAGCTCTA TCGGTATCTG GGCGAATACA CTGACGTGCC GGCCGGGGAT ATCGGCGTCG GTCAGCGGGA GGTAGGCTAC CTGTTCGGCC AGTACAAGCG GATCACCAAC CGCTACGAGT CCGGGGTATT CACCGGCAAG GGGCTGAGCT GGGGCGGCAG CCGCGCCCGC AAGGAAGCGA CCGGCTACGG CACCGTCTAC TTCCTGCAGG AGATGCTCAA GGCGCGCGGT GAGGACCTTG AGGGCAAGAC GTGTGTGGTT TCCGGCTCGG GCAACGTGGC GATCTACGCC ATGGACAAGA TCCGCAAGCT GGGCGGCAAG GTCATCGCCT GCTCCGATTC GAGTGGCATC GTCGTCGACG AGGACGGCAT CGACCTGGAG CGCATCCAGC GCATCAAGGA GGTGGAGCGT CGGCGCATCT CCGTCTACGC CGACGAGCGG CCCAAGGCCC GGTTCGTCGA GGACGGCAAC ATCTGGACGT TGCCGTGTGA CGTGGCGCTG CCGTGTGCGA CGCAGAACGA GCTCAGCGGC AAGGATGCGC GAGAGCTGCT GAACAACGGC TGCACCGCGC TGGCCGAGGG CGCCAACATG CCGTGCACGC CGGAGGCGGT GCGCATGTTC CAGGAGGCGA AGATCGCCTA CGGCCCGGGC AAGGCGGCCA ACGCCGGCGG GGTGGCCACC AGCGCCCTGG AGATGCAGCA AAACGCCAGC CGCGACTCCT GGACCTTCGA GCACACGGAG GAGCGGTTGC ACGAGATCAT GGTAGACATC CACCGCAACT GCTACGAGAC CGCCGACGAG TTCGGCGTCC CTGGGGACTA CGTCACCGGT GCCAACATCA CCGGCTTTAT CAAGGTCAGC AACGCCATGG TCGCCATGGG GCTGATCTAG
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Protein sequence | MTARLDEKLE PIYQDVVRRN PGESEFHQAV HEVLETLGPV MSKYPEFADH KIIQRICEPE RQIIFRVPWQ DDNGEIHINR AFRVEFNSAM GPYKGGMRFH PSVYLGIIKF LGFEQVFKNA ITGMPIGGGK GGSDFDPKGR SDDEIMRFCQ SLMTELYRYL GEYTDVPAGD IGVGQREVGY LFGQYKRITN RYESGVFTGK GLSWGGSRAR KEATGYGTVY FLQEMLKARG EDLEGKTCVV SGSGNVAIYA MDKIRKLGGK VIACSDSSGI VVDEDGIDLE RIQRIKEVER RRISVYADER PKARFVEDGN IWTLPCDVAL PCATQNELSG KDARELLNNG CTALAEGANM PCTPEAVRMF QEAKIAYGPG KAANAGGVAT SALEMQQNAS RDSWTFEHTE ERLHEIMVDI HRNCYETADE FGVPGDYVTG ANITGFIKVS NAMVAMGLI
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