Gene Hhal_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0060 
Symbol 
ID4710467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp70003 
End bp71352 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content64% 
IMG OID639854518 
Productglutamate dehydrogenase 
Protein accessionYP_001001657 
Protein GI121996870 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.742683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCAC GGCTCGACGA GAAACTGGAA CCGATCTATC AGGATGTCGT CCGCCGCAAT 
CCCGGCGAGA GTGAGTTCCA TCAGGCGGTT CACGAGGTCC TCGAGACCCT CGGTCCGGTG
ATGAGCAAGT ATCCGGAGTT CGCAGACCAC AAGATCATTC AGCGGATCTG CGAGCCGGAG
CGGCAGATCA TCTTCCGGGT ACCGTGGCAG GACGATAACG GCGAGATCCA CATCAACCGC
GCCTTCCGGG TGGAGTTCAA CAGCGCCATG GGCCCCTACA AGGGCGGCAT GCGTTTCCAC
CCCTCGGTGT ACCTGGGCAT CATCAAGTTC CTCGGCTTCG AGCAGGTGTT CAAGAACGCC
ATCACCGGCA TGCCTATCGG TGGCGGCAAG GGCGGCAGTG ACTTCGACCC GAAAGGCCGC
TCGGATGACG AGATCATGCG CTTCTGCCAG AGCCTGATGA CCGAGCTCTA TCGGTATCTG
GGCGAATACA CTGACGTGCC GGCCGGGGAT ATCGGCGTCG GTCAGCGGGA GGTAGGCTAC
CTGTTCGGCC AGTACAAGCG GATCACCAAC CGCTACGAGT CCGGGGTATT CACCGGCAAG
GGGCTGAGCT GGGGCGGCAG CCGCGCCCGC AAGGAAGCGA CCGGCTACGG CACCGTCTAC
TTCCTGCAGG AGATGCTCAA GGCGCGCGGT GAGGACCTTG AGGGCAAGAC GTGTGTGGTT
TCCGGCTCGG GCAACGTGGC GATCTACGCC ATGGACAAGA TCCGCAAGCT GGGCGGCAAG
GTCATCGCCT GCTCCGATTC GAGTGGCATC GTCGTCGACG AGGACGGCAT CGACCTGGAG
CGCATCCAGC GCATCAAGGA GGTGGAGCGT CGGCGCATCT CCGTCTACGC CGACGAGCGG
CCCAAGGCCC GGTTCGTCGA GGACGGCAAC ATCTGGACGT TGCCGTGTGA CGTGGCGCTG
CCGTGTGCGA CGCAGAACGA GCTCAGCGGC AAGGATGCGC GAGAGCTGCT GAACAACGGC
TGCACCGCGC TGGCCGAGGG CGCCAACATG CCGTGCACGC CGGAGGCGGT GCGCATGTTC
CAGGAGGCGA AGATCGCCTA CGGCCCGGGC AAGGCGGCCA ACGCCGGCGG GGTGGCCACC
AGCGCCCTGG AGATGCAGCA AAACGCCAGC CGCGACTCCT GGACCTTCGA GCACACGGAG
GAGCGGTTGC ACGAGATCAT GGTAGACATC CACCGCAACT GCTACGAGAC CGCCGACGAG
TTCGGCGTCC CTGGGGACTA CGTCACCGGT GCCAACATCA CCGGCTTTAT CAAGGTCAGC
AACGCCATGG TCGCCATGGG GCTGATCTAG
 
Protein sequence
MTARLDEKLE PIYQDVVRRN PGESEFHQAV HEVLETLGPV MSKYPEFADH KIIQRICEPE 
RQIIFRVPWQ DDNGEIHINR AFRVEFNSAM GPYKGGMRFH PSVYLGIIKF LGFEQVFKNA
ITGMPIGGGK GGSDFDPKGR SDDEIMRFCQ SLMTELYRYL GEYTDVPAGD IGVGQREVGY
LFGQYKRITN RYESGVFTGK GLSWGGSRAR KEATGYGTVY FLQEMLKARG EDLEGKTCVV
SGSGNVAIYA MDKIRKLGGK VIACSDSSGI VVDEDGIDLE RIQRIKEVER RRISVYADER
PKARFVEDGN IWTLPCDVAL PCATQNELSG KDARELLNNG CTALAEGANM PCTPEAVRMF
QEAKIAYGPG KAANAGGVAT SALEMQQNAS RDSWTFEHTE ERLHEIMVDI HRNCYETADE
FGVPGDYVTG ANITGFIKVS NAMVAMGLI