| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0058 |
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| Symbol | |
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| ID | 4710355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 66163 |
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| End bp | 67236 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639854516 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001001655 |
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| Protein GI | 121996868 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCG AAGTCCCGAC CATTTGCCCC GGTAGCCCGG AACTGCCGGA TCTCAGCGAA
GCGCCGGGGA CGTTCTACCT GGCTCCGCCG CTGCAGCACA CGCGGGACCG TGTTTACGTG
CATCTGGGTG ATGCGGGCTG GCGGATCCGC TTCCCCGCTG CGGGGGTCAT GGGGGTCGAG
GTGCCGGCAC AGTCCCTGCC GGCGCTGCTC GCTGCCCTGG AGCCGCTGAT GAGCGAGCCG
GAGATGGCCG CGGGCTCCGC CGTCTTCATG GAGCAGGGCG CGGCGTTCGA TGCCGGATCG
TTGTTCCAGG CCCGCCCGCT ATCCACCTGG GTGGCGCGTG CCGAGCATGA TTGGCTGCTG
GATACGATCC GCAGCGAGCG GGTGCAGATC CACTACCAGC CCATCGTCGA GGCGCGGGAG
GCGCAGCGCG TCTACGCCTA CGAGTGCCTG ATGCGCGGGG TCGATGCCGA CGGGGGGACG
ATCCCGCCCG GGTCGATGTT CCGGGCAGCG GAGCTGGCTG ATCTGGAGTT CTACCTCGAT
CGTCTGGCGC GCGTGGCGGC GATCCGCGAT AGCCACGCCC AGGGGGTCCA GGAGAATCTG
TTCATCAACT TCCGGCCCAC GGCCATCTAC GACCCGGCTT TCTGCCTGCG GACCACCGTG
GGGGCTGTAG AGAAGCTCGG CCTGGATCCG CGCCGCATCG TGTTTGAGGT GGTGGAAAGC
GAGGCGATCA CCGATCATCG CCACCTGCGC CACATCGTCG ATGAGTATCG GCAGGGCGGC
TTCCGCATCG CCCTGGACGA TCTCGGTGCC GGCTACGGGT CCCTGAACTT GCTCAAGGAC
CTGGAGCCGG ATTTCGTTAA GATCGACCGC GAGCTGATTC GGCACGTACA CCACAACCCT
GGTCAGGCCA CCATCGTCGA GGCGATGGTC AGCATGGCCC GCAATCTGGG GATCACCACC
GTCGGGGAGG GGATCGAGGA GCGGGAGGAG TTCGAGTGGC TGCGCGCAGC GGGGATCGAT
CTGGTCCAGG GGTTCTACTT CGCGCGACCG GCGTCACCAC CCCCTCGACT GTGA
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| Protein sequence | MTIEVPTICP GSPELPDLSE APGTFYLAPP LQHTRDRVYV HLGDAGWRIR FPAAGVMGVE
VPAQSLPALL AALEPLMSEP EMAAGSAVFM EQGAAFDAGS LFQARPLSTW VARAEHDWLL
DTIRSERVQI HYQPIVEARE AQRVYAYECL MRGVDADGGT IPPGSMFRAA ELADLEFYLD
RLARVAAIRD SHAQGVQENL FINFRPTAIY DPAFCLRTTV GAVEKLGLDP RRIVFEVVES
EAITDHRHLR HIVDEYRQGG FRIALDDLGA GYGSLNLLKD LEPDFVKIDR ELIRHVHHNP
GQATIVEAMV SMARNLGITT VGEGIEEREE FEWLRAAGID LVQGFYFARP ASPPPRL
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