| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0047 |
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| Symbol | |
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| ID | 4710332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 48718 |
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| End bp | 49674 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639854505 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_001001644 |
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| Protein GI | 121996857 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
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| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.21464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCAAG AGTTTCCGGC CCCACCGGAC AGCGCTGAAA CCCCGTCCGC TCAAGCGGAC
TGCTACCACG CCGGCGCTGG CTACGCCGTC GTTGCGGTCA CCGGCGACGA GGCCCAGGAC
TTCCTGCAGC GCATCCTGAC AGCGGACATC CCACCGCCGG CCGCCAAGCA CAGCGTGCTC
GCCGGACTGT GCACCCCCAA AGGACGTCTG CTGGCCCTGG CCCGGCTGAT CCCCTGGGAC
GACGGGTACC GGCTGGTTCT CCCCGACGAC GTGGCCGGGG CGACCGTGTC GCGCCTGCAG
ATGTACGTGC TGCGCTCCCG GGTCACCGTT GCACCGCCGA CCCCTGACTG GCGCCTGGTC
CGAGCCGCCG GCCCCGGGGC CCGCGCCGTG CTGGCGGAGC GCTGCGGACA CCCCCTACCG
GAGGTCGACG GTGGGGTCAG CCACAGTGCG GACATGGCCA TCGTGCGCAT GCCCGGCACT
CCGGAGCGCT ACTGCGCGGT GGGTCCCGCG AGCCCTGTTC AGGCCCTGGA ACACGCGCTT
GCCGAGTACC TTCCGTCGGC CGATACCGCG GCCTGGCGGG CGATCGAGAT CCGCGCCGGG
CAACCGGAGA TCCGCGCACC GGGGCGCGAG CTCTTCATCC CGCAGATGGT GAATCTCGAT
CGCCTCGGCG GGGTCAGCTT CAGCAAGGGG TGCTTCCCCG GTCAGGAAGT GGTCGCGCGG
ACCCATTACC GGGGCAAGGT CAAGCAGCGG ATGTTCCGGG CCGCCGGCAC GGGACCCGCA
CCGGCGGATG GCTGCGAGAT TCGTGACGCC GAAGGCCAGC TGGCCGGCCA CATCGTCTGC
GCGGCGGAGG TGCCCGAAGG GTTCGTCGCC CTCGCCTCGC TGCGCGAGGC GCAGCTGGAA
ACCGCCCCGC TGAGCGCCGA CGGCCAGCGG CTCCGGCTCA GCGAGGCGGG AGCCTGA
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| Protein sequence | MPQEFPAPPD SAETPSAQAD CYHAGAGYAV VAVTGDEAQD FLQRILTADI PPPAAKHSVL
AGLCTPKGRL LALARLIPWD DGYRLVLPDD VAGATVSRLQ MYVLRSRVTV APPTPDWRLV
RAAGPGARAV LAERCGHPLP EVDGGVSHSA DMAIVRMPGT PERYCAVGPA SPVQALEHAL
AEYLPSADTA AWRAIEIRAG QPEIRAPGRE LFIPQMVNLD RLGGVSFSKG CFPGQEVVAR
THYRGKVKQR MFRAAGTGPA PADGCEIRDA EGQLAGHIVC AAEVPEGFVA LASLREAQLE
TAPLSADGQR LRLSEAGA
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