| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0044 |
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| Symbol | sdhA |
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| ID | 4710323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 45884 |
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| End bp | 47674 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639854502 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001001641 |
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| Protein GI | 121996854 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGAAC CGATCAAAAC GGTCGAGCAC CAGTACGATG TCGTTGTTGT CGGTGCCGGT
GGCGCCGGCC TACGGGCGAC CTTCGGCATG GCGGAACAGG GGCTGAATAC CGCCTGCGTT
ACCAAGGTAT TCCCTACGCG CAGCCATACC GTGGCTGCCC AGGGTGGTGT CTCCGCGGCG
CTCGGCAACA TGGGTGAGGA CGACTGGCGC TGGCACATGT ACGACACCAT CAAGGGCTCG
GACTGGCTCG GGGATCAGGA CGCCATCGAG TACATGTGCC GCGAGGCAGT GCCGGCCATC
GTCGAGCTGG AGCACTACGG CGTGCCCTTC TCGCGCACTG AAGACGGCAA GATCTACCAG
CGCCCGTTTG GCGGCATGAC CACCCACTTC GGGGAGGGGA CGGCCCAGCG GACCTGCGCC
GCTGCTGACC GGACCGGGCA CGCGATCCTG CACACGCTGT ATCAGCAGGC GCTCAAGCAC
AAGGCGGAGT TCTACATCGA GCACTTCGCC ATCGACCTGA TGATGGACGA TGGGGTCTGT
CGGGGTGTGG TGACGCTCGA TATGGAGACC GGTACGGTCC ACATCTTCCG GGCCCACCAG
GTCGTACTGG CCACCGGCGG TTATGGCCGT AGCTACTTCT CCTGCACCTC GGCGCACACC
TGTACGGGCG ACGGTAACGG CATGGTGTTG CGGGCCGGTC TGCCGTTGCA GGATATGGAG
TTCGTCCAGT TCCACCCCAC CGGCATCTAC GGCGCGGGCT GCCTGATTAC CGAGGGGGTG
CGAGGCGAGG GCGGGTATCT CACCAACGCC CAGGGCGAGC GCTTCATGGA GCGGTACGCC
CCCAATGCTA AGGACCTGGC CTCGCGGGAC GTGGTATCGC GGTCGATGAC CATCGAGATC
CGTGAGGGGC GGGGGGTCGG CGAGCACGGC GATCACATCC ACCTGCACCT GGAGCACCTC
GGCCCGGAGG TCATCCACGA GCGACTGCCG GGGATTGCCG AGTCGGCACA GATCTTTGCC
GGCGTGGATG TCACCAAGGA GCCGATCCCG GTTCTGCCCA CCGTCCACTA CAACATGGGC
GGGATCCCCA CCAATCACAT GGGCGAGGTG GTGCACCTCA AGGACGGCGA TCCCGACGCC
GTGGTTCCGG GACTGATGGC GATCGGAGAG GCCGCCTGCG TCTCGGTGCA CGGCGCCAAT
CGCCTGGGTT CGAATTCGCT GCTCGATCTG GTGGTGTTTG GCCGTGCGGC CGCCCACCGA
GCGGCTGAGG TCATCGGTGG CCGCGGCAAG CCCCATGCGC CGCTGCCCGC CGGCGCCGCG
GATCTGGCTC TGCAGCGACT GGACCGGCTG CGCCGCGCCA ACGGCAGCAA GCCGACAGCG
CAGCTGCGCA GAGAGATGCA GAACACCATG CAGAACTACG CCGCGGTCTT CCGTACCGGG
GATGTGTTGG AGCAGGGCTG CAACCGGATG GACGATGTCT TCCGTGGCTT CGCCGATGTC
GGGGTGACCG ACCGGTCGCT GATCTGGAAC TCGGACCTGA TCGAGACGCT GGAGCTGGAG
AATCTCCTGG GTAGTGCCGT GACCACGATT CACTCAGCGC GCAACCGGCT CGAAAGTCGC
GGGGCCCACG CCCGCGAGGA TTACGCCGAG CGCGATGACG AGAACTGGCT CAAGCACACG
CTGTCGACGC TGCGCAGCGA CGGCTCCGTG GATATCGCCT ATCGCCCCGT CCACCTCCAT
ACCCTGAGCG ACGACGTGGA GGCGATCCCT CCCAAGGCCC GGGTGTACTA A
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| Protein sequence | MTEPIKTVEH QYDVVVVGAG GAGLRATFGM AEQGLNTACV TKVFPTRSHT VAAQGGVSAA
LGNMGEDDWR WHMYDTIKGS DWLGDQDAIE YMCREAVPAI VELEHYGVPF SRTEDGKIYQ
RPFGGMTTHF GEGTAQRTCA AADRTGHAIL HTLYQQALKH KAEFYIEHFA IDLMMDDGVC
RGVVTLDMET GTVHIFRAHQ VVLATGGYGR SYFSCTSAHT CTGDGNGMVL RAGLPLQDME
FVQFHPTGIY GAGCLITEGV RGEGGYLTNA QGERFMERYA PNAKDLASRD VVSRSMTIEI
REGRGVGEHG DHIHLHLEHL GPEVIHERLP GIAESAQIFA GVDVTKEPIP VLPTVHYNMG
GIPTNHMGEV VHLKDGDPDA VVPGLMAIGE AACVSVHGAN RLGSNSLLDL VVFGRAAAHR
AAEVIGGRGK PHAPLPAGAA DLALQRLDRL RRANGSKPTA QLRREMQNTM QNYAAVFRTG
DVLEQGCNRM DDVFRGFADV GVTDRSLIWN SDLIETLELE NLLGSAVTTI HSARNRLESR
GAHAREDYAE RDDENWLKHT LSTLRSDGSV DIAYRPVHLH TLSDDVEAIP PKARVY
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