| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0038 |
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| Symbol | |
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| ID | 4710927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 40313 |
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| End bp | 41302 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639854496 |
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| Product | sigma E regulatory protein, MucB/RseB |
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| Protein accession | YP_001001635 |
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| Protein GI | 121996848 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3026] Negative regulator of sigma E activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.622863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGATCC CTGACCGTGC GTGGTTCCTC CGCGCACTCC TGTGCGCCGG CCTTTTCTGG
ATCGCCAACG GCCAGGTGGC CCTGGCGGAG GGTACGGATC GGGGCGCGGG CGAAGAGGGC
CGGGAGGCCC TCAACCGGAT GGTCGAGGCC CTGGATCAGC ACTCCTATGA GGGGATCTTT
GTCTACGCCC GGGCCGGGGT GGTGGAGACC GTGCACATCG TGCACAGAGC CGGTGATTCG
GGGCGCCATC AGCGGCTGGA GATGCTCACC GGCTCCCATC GGGAGATGAT CCGCACCCCG
GAGGGCGCCC TGCTTGCCGG CCCCATTGCT AAGGGCGATC GCCTGCGTGG CAGTGGCGTG
GTCACCTCCC TCGGCGAGGG GTGGCCCCGG GCGGACAGCA TCTCCGAAGA CCTCTACCGC
ATCCAGCTCC AAGGCGAGGG ACGGGTCGCC GGCCGCCCGA CTACGGTCAT CGCCGTCGAA
CCACTGGATC AGTTGCGTTA CGGTCACCGG CTGTGGGTCG ACGAGGAGAG CGGCCTACCG
CTTCATGCCC AGTTGCTCGA CGGGCGCCGC GTCATCGAAC GCCTGCTGTT CACGAGCTTC
ACCCTTCGTG ACGATATCGA CGCCGAAGAG TTGGAGCCCG TTGGTGAGGC GCAGCGGCGG
GTCGAGCGGC GCCTGGCCGA GGAGAGCGAC GACAGCGGCG AGCCGGAGTG GGAAGTGATC
GATGTACCGG CGGGTTTCTC ACGCATCGCA CACGGTCGTA TTCCCTCACC CGAGCCGGGG
CAGGACCCCA TCGAGCACCT GCTGTTTAGC GATGGCCTGG CCTCCGTCTC CGTCTATATC
GCCCCAGAGC CGGGCGGTAA CGAGGGCCAG GCGCGGGCCG GCGCCCTCCA TGCCTACGAG
CGCCCCGTGG AGGACCATCA GGTCACCGCC ATCGGCGATG TCCCGGCCAA GACCGTGGAA
CGGTTCGCGA GGCAGACGCG ACGGCGCTAG
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| Protein sequence | MGIPDRAWFL RALLCAGLFW IANGQVALAE GTDRGAGEEG REALNRMVEA LDQHSYEGIF
VYARAGVVET VHIVHRAGDS GRHQRLEMLT GSHREMIRTP EGALLAGPIA KGDRLRGSGV
VTSLGEGWPR ADSISEDLYR IQLQGEGRVA GRPTTVIAVE PLDQLRYGHR LWVDEESGLP
LHAQLLDGRR VIERLLFTSF TLRDDIDAEE LEPVGEAQRR VERRLAEESD DSGEPEWEVI
DVPAGFSRIA HGRIPSPEPG QDPIEHLLFS DGLASVSVYI APEPGGNEGQ ARAGALHAYE
RPVEDHQVTA IGDVPAKTVE RFARQTRRR
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