Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0025 |
Symbol | |
ID | 4710230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 26958 |
End bp | 28355 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639854483 |
Product | fumarate lyase |
Protein accession | YP_001001622 |
Protein GI | 121996835 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAAG ACGGTTACCG GATCGAGCGC GACAGCATGG GGGAACTCCA GGTCCCTGCG GACGCCCTGT ACGGCGCCCA GACCCAGCGC GCGGTGCAGA ACTTCCCGGT TAGCGGACAG CCGATGCCTC GGCCCTTCAT CCAGGCCCTG GGGCTGATCA AGGCGGCTTG CGCGCGGGCC AACCGAGAAG TCTCCGGACT CGATCCGACC GTCGCCGAGG CCATCGTGGA GGCAGCCGAG GCCGTCGCCC GCGGCGAGCA CGACGATCAC TTCCCCATCG ACGTGTTCCA GACCGGGTCG GGGACCTCGA GCAACATGAA CGCCAACGAG GTAATCGCCC GACTGGCCAG CGAACGGGCC GGTGTGACGG TGCACCCCAA CGACCATGTC AACATGGGGC AGAGCTCCAA TGACGTGATC CCGACGGCGA TCCACGTCAG CGCCGCACTG GAGGTCCACG ACCGGCTCCT GCCGGCGCTG CGCCGACTGG CGGACACCAT CGAGCAACGC GCCACGGAAC TCGCGGACGT CACCACCACC GGGCGGACCC ACCTCATGGA CGCCATGCCG GTGACGCTTG GCCAGGAACT CTCCGGTTGG GCCGCGCAGG TGCGCAATGG GGTCAGCCGG ATCGAGGCCA GCCTGCCGCG GCTGCACGCC CTGGCCCAGG GGGGGACCGC CGTCGGCACC GGGATCAACG CCCCGGCAGC GTTCGGCGAG CAAGTGAGCA AGCGGCTGGC CGAGGCCAGT GGTGTGCCGT TTACCCCGGC GCCCAATCGC TTCGAGGCGC TGTCCAGTCA GGACGCCGCG GTGGAGCTAT CCGGTCAGCT GCGCACCGTC GCTGTCTCGC TGATGAAGGT CGCTAACGAC CTGCGCTGGA TGAACAGCGG CCCCCTGGCC GGCCTTGGCG AGATCAGCCT ACCCGCCCTG CAGCCGGGCT CAAGCATCAT GCCGGGTAAG GTCAACCCGG TGATCCCCGA GTCCGTGGCC ATGGTCGCGG CCCAGGTCAT GGGCAACGAC ACCACGATCT CGGTGGCCGG CCAGTCCGGG AATTTCCAGC TCAACGTCAT GCTGCCGGTC ATCGGCTACA ACGTGCTCCA GAGTATCGAT CTTCTGACCA ATGCCTCGAC CATCCTCGGG CAGGACGCCA TCGCCGGATT CACCGTCAAC GAGGAGAACC TGCGCGCTGC CCTGGATCGG AACCCGATCC TGGTCACCGC TCTGAATGCG GTCATCGGTT ACGAGAAGGG GGCGGAGGTG GCCAAGCAGG CCTACCGGGA CGGGCGCCCG GTGATCGAAG TGGCCCGCGA GATGACCGAT TTGTCCGAGA GCGAGCTGCA GCGCTTGCTG GATCCGCGGG AACTGGCGCG CGGCGGCATC CCAGGGCAGG GGGAGTAG
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Protein sequence | MSQDGYRIER DSMGELQVPA DALYGAQTQR AVQNFPVSGQ PMPRPFIQAL GLIKAACARA NREVSGLDPT VAEAIVEAAE AVARGEHDDH FPIDVFQTGS GTSSNMNANE VIARLASERA GVTVHPNDHV NMGQSSNDVI PTAIHVSAAL EVHDRLLPAL RRLADTIEQR ATELADVTTT GRTHLMDAMP VTLGQELSGW AAQVRNGVSR IEASLPRLHA LAQGGTAVGT GINAPAAFGE QVSKRLAEAS GVPFTPAPNR FEALSSQDAA VELSGQLRTV AVSLMKVAND LRWMNSGPLA GLGEISLPAL QPGSSIMPGK VNPVIPESVA MVAAQVMGND TTISVAGQSG NFQLNVMLPV IGYNVLQSID LLTNASTILG QDAIAGFTVN EENLRAALDR NPILVTALNA VIGYEKGAEV AKQAYRDGRP VIEVAREMTD LSESELQRLL DPRELARGGI PGQGE
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