Gene Hhal_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0025 
Symbol 
ID4710230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp26958 
End bp28355 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content68% 
IMG OID639854483 
Productfumarate lyase 
Protein accessionYP_001001622 
Protein GI121996835 
COG category[C] Energy production and conversion 
COG ID[COG0114] Fumarase 
TIGRFAM ID[TIGR00979] fumarate hydratase, class II 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAAG ACGGTTACCG GATCGAGCGC GACAGCATGG GGGAACTCCA GGTCCCTGCG 
GACGCCCTGT ACGGCGCCCA GACCCAGCGC GCGGTGCAGA ACTTCCCGGT TAGCGGACAG
CCGATGCCTC GGCCCTTCAT CCAGGCCCTG GGGCTGATCA AGGCGGCTTG CGCGCGGGCC
AACCGAGAAG TCTCCGGACT CGATCCGACC GTCGCCGAGG CCATCGTGGA GGCAGCCGAG
GCCGTCGCCC GCGGCGAGCA CGACGATCAC TTCCCCATCG ACGTGTTCCA GACCGGGTCG
GGGACCTCGA GCAACATGAA CGCCAACGAG GTAATCGCCC GACTGGCCAG CGAACGGGCC
GGTGTGACGG TGCACCCCAA CGACCATGTC AACATGGGGC AGAGCTCCAA TGACGTGATC
CCGACGGCGA TCCACGTCAG CGCCGCACTG GAGGTCCACG ACCGGCTCCT GCCGGCGCTG
CGCCGACTGG CGGACACCAT CGAGCAACGC GCCACGGAAC TCGCGGACGT CACCACCACC
GGGCGGACCC ACCTCATGGA CGCCATGCCG GTGACGCTTG GCCAGGAACT CTCCGGTTGG
GCCGCGCAGG TGCGCAATGG GGTCAGCCGG ATCGAGGCCA GCCTGCCGCG GCTGCACGCC
CTGGCCCAGG GGGGGACCGC CGTCGGCACC GGGATCAACG CCCCGGCAGC GTTCGGCGAG
CAAGTGAGCA AGCGGCTGGC CGAGGCCAGT GGTGTGCCGT TTACCCCGGC GCCCAATCGC
TTCGAGGCGC TGTCCAGTCA GGACGCCGCG GTGGAGCTAT CCGGTCAGCT GCGCACCGTC
GCTGTCTCGC TGATGAAGGT CGCTAACGAC CTGCGCTGGA TGAACAGCGG CCCCCTGGCC
GGCCTTGGCG AGATCAGCCT ACCCGCCCTG CAGCCGGGCT CAAGCATCAT GCCGGGTAAG
GTCAACCCGG TGATCCCCGA GTCCGTGGCC ATGGTCGCGG CCCAGGTCAT GGGCAACGAC
ACCACGATCT CGGTGGCCGG CCAGTCCGGG AATTTCCAGC TCAACGTCAT GCTGCCGGTC
ATCGGCTACA ACGTGCTCCA GAGTATCGAT CTTCTGACCA ATGCCTCGAC CATCCTCGGG
CAGGACGCCA TCGCCGGATT CACCGTCAAC GAGGAGAACC TGCGCGCTGC CCTGGATCGG
AACCCGATCC TGGTCACCGC TCTGAATGCG GTCATCGGTT ACGAGAAGGG GGCGGAGGTG
GCCAAGCAGG CCTACCGGGA CGGGCGCCCG GTGATCGAAG TGGCCCGCGA GATGACCGAT
TTGTCCGAGA GCGAGCTGCA GCGCTTGCTG GATCCGCGGG AACTGGCGCG CGGCGGCATC
CCAGGGCAGG GGGAGTAG
 
Protein sequence
MSQDGYRIER DSMGELQVPA DALYGAQTQR AVQNFPVSGQ PMPRPFIQAL GLIKAACARA 
NREVSGLDPT VAEAIVEAAE AVARGEHDDH FPIDVFQTGS GTSSNMNANE VIARLASERA
GVTVHPNDHV NMGQSSNDVI PTAIHVSAAL EVHDRLLPAL RRLADTIEQR ATELADVTTT
GRTHLMDAMP VTLGQELSGW AAQVRNGVSR IEASLPRLHA LAQGGTAVGT GINAPAAFGE
QVSKRLAEAS GVPFTPAPNR FEALSSQDAA VELSGQLRTV AVSLMKVAND LRWMNSGPLA
GLGEISLPAL QPGSSIMPGK VNPVIPESVA MVAAQVMGND TTISVAGQSG NFQLNVMLPV
IGYNVLQSID LLTNASTILG QDAIAGFTVN EENLRAALDR NPILVTALNA VIGYEKGAEV
AKQAYRDGRP VIEVAREMTD LSESELQRLL DPRELARGGI PGQGE