Gene Hhal_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0017 
Symbol 
ID4710746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp17877 
End bp18401 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content61% 
IMG OID639854473 
Product3-hydroxydecanoyl-(acyl carrier protein) dehydratase 
Protein accessionYP_001001614 
Protein GI121996827 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID[TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.292818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAAGC AACACAGTTA CAACCGAGAC GAACTCCTGC TGAGCGGTCA CGGTCGGCTC 
TTCGGGCCGG GCAACCCCCA GCTACCCAGC CCGAACATGC TCATGTTCGA CCGGATCACG
CGCATCAATG AAGATGGAGG TCAGTACGGC AAGGGTGAGG TCGTCGCGGA GCTCGATGTC
CATCCGGAGC TCTGGTTCTT CCGTTGTCAC TTTGCGGGGG ATCCGGTCAT GCCCGGATGC
CTGGGACTGG ACGCGCTCTG GCAGATGGTC GGTTTCTACC TCGGTTGGAT CGGGGGCCAC
GGGGCCGGTC GTGCGCTGGG CTGTGGCGAG GTCAAATTCA CCGGTCAGAT ACTCCCGGAC
AATCGGCTGG TTACGTACAA TGTGGCGCTC AAGAGGGTGA TCAACCGCCG ATTGGTCATG
GGGATCGCCG ATGGCAGCGT GGCCGTCGAC GGTGAGACGA TTTACGAAGC TACTGATCTG
AAAGTCGGGC TCTTCCAGAA CACCGGCGAG CTGAACGGGG CATAG
 
Protein sequence
MVKQHSYNRD ELLLSGHGRL FGPGNPQLPS PNMLMFDRIT RINEDGGQYG KGEVVAELDV 
HPELWFFRCH FAGDPVMPGC LGLDALWQMV GFYLGWIGGH GAGRALGCGE VKFTGQILPD
NRLVTYNVAL KRVINRRLVM GIADGSVAVD GETIYEATDL KVGLFQNTGE LNGA