Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJJ81176_1698 |
Symbol | rpsC |
ID | 4683273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
Kingdom | Bacteria |
Replicon accession | NC_008787 |
Strand | - |
Start bp | 1591248 |
End bp | 1591949 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639854425 |
Product | 30S ribosomal protein S3 |
Protein accession | YP_001001345 |
Protein GI | 121612744 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000141955 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACAAA AAGTTAATCC AATTGGTCTA AGACTAGGAA TCAATAGAAA TTGGGAATCA AGATGGTTTC CGACTAAAGC AAATTTAGTA GAAAATATCG GTGAAGATTA CAAAATCAGA GCTTTCTTAA AAAGAAAACT TTATTACGCA GGAATCAGTC AAATTTTAGT AGAAAGAACT GCTAAAAAAC TTCGCGTTAC TGTAGTTGCC GCAAGACCAG GTATCATCAT CGGTAAAAAA GGTAGTGATG TTGATAATTT AAGAAAAGAA TTGCAAGATT TAATCGGTAA AGATGTAAAT ATCAATATCA AAGAAGAAAG AAAAGCAGGA GCTTCAGCTC AACTTGCTGC TGAAAGTGTT GCAACTCAAC TTGAAAAAAG AATTGCTTTT AGAAGAGCGA TGAAAAAAGT AATTCAAGGT GCGCAAAAAG CAGGTGCTAA AGGGATTAAA GTTTCAGTTT CTGGTCGTTT AGGCGGTGCT GAAATGGCAA GAACAGAATG GTATCTTGAA GGACGCGTTC CACTTCATAC TTTAAGAGCA AAAATTGATT ATGGTTTTGC AGAAGCTAGA ACTACTTATG GAAACATAGG GGTTAAAGTA TGGATCTTTA AAGGTGAAGT ATTGCACAAA GGTATGCAAC CTGAAAAAAC TGAAGAAAGT GCTCCAGCTA AAAAGCCAAG ACGCACAAGA AGGGGTAAAT AA
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Protein sequence | MGQKVNPIGL RLGINRNWES RWFPTKANLV ENIGEDYKIR AFLKRKLYYA GISQILVERT AKKLRVTVVA ARPGIIIGKK GSDVDNLRKE LQDLIGKDVN INIKEERKAG ASAQLAAESV ATQLEKRIAF RRAMKKVIQG AQKAGAKGIK VSVSGRLGGA EMARTEWYLE GRVPLHTLRA KIDYGFAEAR TTYGNIGVKV WIFKGEVLHK GMQPEKTEES APAKKPRRTR RGK
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