| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_1678 |
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| Symbol | topA |
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| ID | 4683417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008787 |
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| Strand | - |
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| Start bp | 1578474 |
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| End bp | 1580576 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639854405 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001001325 |
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| Protein GI | 121613434 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAA ATTTAATCAT AGTAGAATCT CCTGCAAAAG CTAAAACCAT AGGAAATTTT
TTGGGAAAAG ATTATGAAGT TATCGCTTCC AAAGGACATA TTAGAGATTT GCCTAAATCA
AGCTTTGGGA TTAAAATAGA AGATGATGAA TTTATCCCTG AGTATAGAAT CACAAGTGAT
CATAGCGCCT TAGTTAAAGA ACTTAAAAGC AAAGCCAAAG ATGCCAAAGA AGTCTATCTT
GCAACGGATG AGGATAGAGA AGGAGAGGCT ATAGCCTATC ATATTGCAAA AGCTATAGGA
AAAGATGAAA ACACCTTACC ACGTATTGTT TTTCATGAAA TCACTAAAAA CGCTATAGAA
AATGCTTTAA AAAATCCAAG AAAATTAGAT ATGCACTCTG TAAATGCTCA GCAAACTAGA
CGCCTTTTAG ATCGCATTGT AGGGTATAAG CTCAGCCCTT TATTGGGACA AAAAATTCAA
AGAGGACTTA GTGCTGGGCG TGTTCAAAGT GCAGCTTTAA AGATCATAGT CGATCGTGAA
AAAGAAATTC GTGCCTTTGT ACCCCTAGAA TACTTTAGCA TAGATATGAT TTTTCAAAAA
GATTTAGATG CAGAACTAGT TGAGTTTGAT AAAGCCAAGA TAGAAAAACT TACCATTGCT
AACAAAGATC GTGCTAAACT CATACTAGAG GCTTGTAAAA ATGAAGCTTA TACTATAAGC
GACATTGAAA GTAAAGAAAG AAAAATCGCT CCACCGCCTC CTTTTATGAC TTCAACCTTG
CAGCAAAGTG CTAGCAATCG CCTTGGTTTT AACCCTAAAA AAACCATGAT GATAGCTCAA
AAACTCTATG AGGGAGTAAA TACCCATGAA GGCGTGATGG GGGTTATTAC CTACATGAGA
ACCGATAGTT TAAATTTGGC CAAAGAAGCT ATAGAGAATG CAAGAAAATT CATACAAGCA
AATTTTGGCA AAGACTATCT TCCAAGTAAA GCAAATGTAT ACACTACAAA AGCCAAAGGT
GCTCAAGAAG CTCATGAAGC TATACGTCCT ACAAATTTAA GTTTTACTCC AGAAATTGCG
GCCAAATTTT TAGACAAAGA TGAGTTAAAA CTTTACACAC TTATTTACAA TCGCTTTTTA
GCCTGTCAGA TGAATCCTGC TATCTCTCAA ACTCAAAATG TATTTGTAAA AAATGATAGA
GCAGTTTTTA AAATAAGCGG TAGAAAAATC CTTTTTGATG GATATTATAA AGTTTATGGT
GATATGGATA AGGATAAAAT TTTACCAAAT TTTAAAATAG GTGAAAATTT AAAAATACAA
AATTTAGAAA TGAACTCACA TTTTACCGAA CCACCTTCAA GGTATTCAGA AGCAGGACTT
GTAAAAAAAC TTGAAAGTTT AGGCATAGGT CGCCCTTCTA CCTATGCGCC AACCATTTCT
ATACTTACAA GCCGTGATTA TGTAAAAATA GATAAAAAAC AACTCATTCC TAGCGATGTT
GCTTTTAATG TAACCGAAGT GCTTGAAAAA AATTTTAGCG ATATAGTAGA TAGTAAATTT
ACTTCAAACC TTGAAAATAC CTTAGATGAA ATCGCAGAAG ATAAGGCAGA TTGGCAAGAA
ACTTTAAAAG AATTTTACTA TCCTTTTATG AGAAAAATCG AAGAAGGAAA AACAAAAATA
GCTAGTCAAA AAACTGTCAC AAAGCTAGGC GAAAGTTGTC CTGATTGTGG CGGGGAGCTT
GCTATTAGAA AAGGGCGTTT TGGAGAATTT GTAGCGTGTT TAAATTTCCC AAAATGTAAG
TATTCAAGAA ATTTAAAAAG TGAAAGTAAA AATGAAAGCG AAAATACTGC TGCAAAAGCT
AAAGCTAATG GTACAGGTAT TACTTGTCCA AGTTGTCAAA AAGGTGAAAT CGTAGAACGC
TTTTCAAAAC GCGGTAAATT TTATGGTTGT AGTGCTTATC CAAAATGCAA TTTTATAAGC
AAATACAAAC CAAGTGAAGA AAAATGCGAA GAGTGTGGCG AAACTTTAGT GATAAAAGAG
CTTAAAAAAG GTATATTCTT AGAATGCTTA AAGTGCAAAA TCAAAAAAGA AATGAAGGAT
TAG
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| Protein sequence | MKKNLIIVES PAKAKTIGNF LGKDYEVIAS KGHIRDLPKS SFGIKIEDDE FIPEYRITSD
HSALVKELKS KAKDAKEVYL ATDEDREGEA IAYHIAKAIG KDENTLPRIV FHEITKNAIE
NALKNPRKLD MHSVNAQQTR RLLDRIVGYK LSPLLGQKIQ RGLSAGRVQS AALKIIVDRE
KEIRAFVPLE YFSIDMIFQK DLDAELVEFD KAKIEKLTIA NKDRAKLILE ACKNEAYTIS
DIESKERKIA PPPPFMTSTL QQSASNRLGF NPKKTMMIAQ KLYEGVNTHE GVMGVITYMR
TDSLNLAKEA IENARKFIQA NFGKDYLPSK ANVYTTKAKG AQEAHEAIRP TNLSFTPEIA
AKFLDKDELK LYTLIYNRFL ACQMNPAISQ TQNVFVKNDR AVFKISGRKI LFDGYYKVYG
DMDKDKILPN FKIGENLKIQ NLEMNSHFTE PPSRYSEAGL VKKLESLGIG RPSTYAPTIS
ILTSRDYVKI DKKQLIPSDV AFNVTEVLEK NFSDIVDSKF TSNLENTLDE IAEDKADWQE
TLKEFYYPFM RKIEEGKTKI ASQKTVTKLG ESCPDCGGEL AIRKGRFGEF VACLNFPKCK
YSRNLKSESK NESENTAAKA KANGTGITCP SCQKGEIVER FSKRGKFYGC SAYPKCNFIS
KYKPSEEKCE ECGETLVIKE LKKGIFLECL KCKIKKEMKD
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