Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJJ81176_1626 |
Symbol | rnc |
ID | 4682450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
Kingdom | Bacteria |
Replicon accession | NC_008787 |
Strand | - |
Start bp | 1537361 |
End bp | 1538038 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639854353 |
Product | ribonuclease III |
Protein accession | YP_001001278 |
Protein GI | 121613213 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.140221 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAAA ACATTGAAAA ACTAGAGCGG AGTTTAACTT ATGAATTTAA AGATAAAAAT CTTCTCATAC ATGCTTTAAC CCATAAAAGT TTTAAAAAAT CTTACAACAA CGAACGCTTG GAATTTTTAG GTGATGCTGT GCTTGATTTA GTTGTGGGTG AATACCTTTT TCATAAATTC GCTAAAGATG CCGAAGGAGA TTTATCTAAG CTTAGAGCGG CTTTAGTGAA TGAAAAGTCT TTTGCAAAAA TTGCAAATAG TTTAAATTTG GGCGATTTTA TTTTTATGAG TGTTGCTGAG GAAAACAATG GAGGAAAAGA AAAGCCTTCT ATACTTTCAG ATGCGTTAGA AGCCATTATA GGTGCTATAC ATTTAGAAGC TGGATTTGAG TTTGCAAAAA CTATTGCTTT AAGACTTATA GAAAAAAATT TCCCTCAAAT TGATGCAAAA ATTCTTATAA AAGATTATAA AACAAAATTA CAAGAGATTA CACAGGGAAA AATAGGACAA ACTCCGCAGT ATGAAACAGT GCGTGCTTTT GGTCCTGATC ATTTAAAGCA ATTTGAAATC GCTTTAATGC TTGATGGTAA AGAACTTGCA AGAGCTATTG CGGGAAGCAA AAAAGAAGCA CAGCAAATGG CAGCAAAAAT TGCACTTGAG AAATTAGGAG CTTTATAG
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Protein sequence | MMKNIEKLER SLTYEFKDKN LLIHALTHKS FKKSYNNERL EFLGDAVLDL VVGEYLFHKF AKDAEGDLSK LRAALVNEKS FAKIANSLNL GDFIFMSVAE ENNGGKEKPS ILSDALEAII GAIHLEAGFE FAKTIALRLI EKNFPQIDAK ILIKDYKTKL QEITQGKIGQ TPQYETVRAF GPDHLKQFEI ALMLDGKELA RAIAGSKKEA QQMAAKIALE KLGAL
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