Gene CJJ81176_1581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCJJ81176_1581 
SymbolrpsD 
ID4683623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter jejuni subsp. jejuni 81-176 
KingdomBacteria 
Replicon accessionNC_008787 
Strand
Start bp1499876 
End bp1500502 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content36% 
IMG OID639854308 
Product30S ribosomal protein S4 
Protein accessionYP_001001237 
Protein GI121612243 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0522] Ribosomal protein S4 and related proteins 
TIGRFAM ID[TIGR01017] ribosomal protein S4, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGAT ATAGAGGACC AGTAGAAAAA TTAGAAAGAC GCTTTGGTGT TAGCTTAGCA 
TTAAAAGGAG AAAGAAGACT AGCTGGCAAA AGTGCACTAG ATAAACGCCC TTATGCACCA
GGACAACACG GAGCAAGAAA AGGTAAAATT AGTGAGTATG GGCTTCAATT AAGAGAAAAA
CAAAAAGCTA AATTTATGTA TGGAGTAAGC GAAAAGCAAT TCCGTCGTTT ATTTGCTGAA
GCAGCAAGAA GAGAAGGAAA TACAGGGGTA TTACTTATCC AACTTTTAGA ACAAAGATTA
GACAATGTAG TATATAGAAT GGGTTTTGCT ACAACACGTC GTTTTGCAAG ACAACTTGTA
ACACATGGAC ATGTTTTAGT AAATGGTAAA AGAGTGGATA TTCCTAGCTT TAGAGTAGAA
GCAGGTGCTA AAATCGAAAT TATCGAAAAA AGCAAAAACA ATCCACAAAT AACAAGAGCT
ATCGAACTTA CAGCACAAAC TGGAATCGTT GCTTGGGTTG ATGTTGAAAA AGATAAGAGA
TTTGGAATTT TCACAAGAAA ACCTGAGAGA GAAGAAGTTG TCATTCCGGT TGAGGAAAGA
TTTATCGTTG AGCTTTACTC TAAGTAA
 
Protein sequence
MARYRGPVEK LERRFGVSLA LKGERRLAGK SALDKRPYAP GQHGARKGKI SEYGLQLREK 
QKAKFMYGVS EKQFRRLFAE AARREGNTGV LLIQLLEQRL DNVVYRMGFA TTRRFARQLV
THGHVLVNGK RVDIPSFRVE AGAKIEIIEK SKNNPQITRA IELTAQTGIV AWVDVEKDKR
FGIFTRKPER EEVVIPVEER FIVELYSK