| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_1438 |
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| Symbol | kpsD |
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| ID | 4683574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008787 |
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| Strand | - |
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| Start bp | 1361586 |
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| End bp | 1363244 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 639854164 |
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| Product | capsular polysaccharide ABC transporter, periplasmic polysaccharide-binding protein |
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| Protein accession | YP_001001094 |
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| Protein GI | 121613488 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.473166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TATTAATTTT ACTTTTTAGT TGTATTTTAT GTTTTGGAGC TGTGGATGTT
TCACAAATCA TTTCAGCAGA GGATCAAGGT TCTACTACAA CTAGCATAGA TCAAAATTTA
AGCTCAAATT ATGATATAGC AAATAAAGAA AATAATCTTA CAAAAATTCA TCAAATTTTA
GTATTCGGTG CTCATCTTTT TAATGGAAAT TTTAAAAATT ACAATCAAAG AGTTTATAAC
CCAGATTATA AGATCGCAGT TGGTGATCAA ATCAGTCTTA AAATTTGGGG AGCTGTTGAG
TTTTCGCAAG TTTTAGTGGT GGATTCTCAA GGAAATATTT TTATCCCTAA AGTAGGAGCT
GTAAATTTAC TAGGTGTGAA AAATAGCGCC CTTGTAAGTG TTATAAAAGC ACGTGTTAAT
AAAATCTATA AAAGCAATGT TTTTGTTTAT GCAGATATGA ATGCTTATCA AAATGTCAGT
GTTTTTGTAA CAGGAAGTGT TAATGCTCCA GGACTTTATC AAGGACTTAG TTCGGATTCA
GTGATACAGT ATCTTGATAA AGCAGGGGGT ATAAATTTAG AATATGGAAG TTTTAGAGAT
ATTCAAATTT TGCGTAATAA CAGCGTGATA AAAAATATTG ATTTATATGA TTTTTTACTA
AAAGGGCAAA TGGATCTTTT TCCTTTTAGA AGCGGAGATG TTATTTTAGT AGGAAATGTT
CAAAATTACG CTTTTGTTGA TGGTGATGTG CAAAGACCTT TTCGTTTTGA ACTTTCAAAT
GATATTAAAA CTTTAGCTGA CTTAGCTAGA GTATCAGGTG CTAAACCTAT CGTGACTAAT
GCTATCGTAA AAAGTTATGG TGAAGATCAT AAACTTGATG TCAGTGCTTA TAATAAAATG
CAATTTTCAA AAGTTTTACT TAGAACGGGA GATGAGGTAG AATTTCACCC TGAGTATGTT
TCTAAAAATA TAACTATAAG TGTAAATGGC GAGCATAATG GTTTAAAAAC TTTAGTTGTG
GGTAAAGGAA CGACTTTAGA AGATATTTCT AAATTAATTA AAGCTAATCC ACAATCAAAC
ATGCAAGCTT TACAAGTGTT TAGAAAAAGT GTAGCTAGAA CTCAAAAAGA ACTTATCAAT
GCTCAGCTTA AAGAGCTTGA AACTCTAGCT TTAACTAGTG GTTCTGTTAC AGCTCAAGGT
GCAGCTATAA GAGCTCAACA AGCAAAAACA ATTTTAGAAT TTATCCAAAG AGCTAAGCAA
GTAGAGCCTA AGGGTCAAAT TGTCATTGAT AATCCAAAGT CTTATAATTC GGTTATTTTA
GAAGATGGTG ATACTATTAA TGTACCAAGT AAGAATAATC TCATCATAGT TCAAGGTGAG
GTTTCTTTAC CTGGAGCTTT TGTGTATGAT AAGGGCAAAG ATTTAAGATA TTATATCAAT
CTTGCAGGAG GTTATGGAGA AAGAGCGGAT ACTTCAAAAG TTTTGGTGAT ACGAAGCAAT
GGAAAAGCTG AAAAATATCA TAGTGGTATA GATATGAAAC CAGGCGATTC TGTGTTGGTA
TTGCCAAAAG TAGATAGTGA GAATTTGCAA ATTTTTTCAA TGTTAACTCA AATTCTTTAT
CAAATTGCTA TTGCAACCAA TGTTGTGCTT AATCTTTAA
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| Protein sequence | MKKILILLFS CILCFGAVDV SQIISAEDQG STTTSIDQNL SSNYDIANKE NNLTKIHQIL
VFGAHLFNGN FKNYNQRVYN PDYKIAVGDQ ISLKIWGAVE FSQVLVVDSQ GNIFIPKVGA
VNLLGVKNSA LVSVIKARVN KIYKSNVFVY ADMNAYQNVS VFVTGSVNAP GLYQGLSSDS
VIQYLDKAGG INLEYGSFRD IQILRNNSVI KNIDLYDFLL KGQMDLFPFR SGDVILVGNV
QNYAFVDGDV QRPFRFELSN DIKTLADLAR VSGAKPIVTN AIVKSYGEDH KLDVSAYNKM
QFSKVLLRTG DEVEFHPEYV SKNITISVNG EHNGLKTLVV GKGTTLEDIS KLIKANPQSN
MQALQVFRKS VARTQKELIN AQLKELETLA LTSGSVTAQG AAIRAQQAKT ILEFIQRAKQ
VEPKGQIVID NPKSYNSVIL EDGDTINVPS KNNLIIVQGE VSLPGAFVYD KGKDLRYYIN
LAGGYGERAD TSKVLVIRSN GKAEKYHSGI DMKPGDSVLV LPKVDSENLQ IFSMLTQILY
QIAIATNVVL NL
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