| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_1284 |
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| Symbol | mnmC |
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| ID | 4682848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008787 |
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| Strand | - |
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| Start bp | 1200132 |
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| End bp | 1201973 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 639854011 |
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| Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
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| Protein accession | YP_001000944 |
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| Protein GI | 121612617 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000566158 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG CTAAGCTAAT CTTTAAGGAT AATACTCCTT TTTCTTTGGA TTTTGATGAT
TTTTATTTTA ATTCCAAAGA CGGCTTAAAT GAAAGTAAAT TTGTTTATAC TCATTCTTTT
GAATGGAAAA ATCAAGAAAA TTTTATTATC GCAGAGAGTG GTTTTGGTAT AGGTTTAAAT
TTTTTTCTTA CTTTGAAACG CTTTTTACAA ACTACCCCTT CTAAGCGTCC TAAAAAACTT
TTTTATATTA GCGTAGAAGC TTTTTATATC GAAAAAGAAC AATTAAGAGA AATTTATCAA
AAACTAGGAT TTTATGAAGA GTTTAAAGAG CTTTTAGAAC AATTTTTAAA ATTTTATCCT
AAGGCTAAAG AAGGAATTTA TCGTTTTTAT TTTGAAGATT GTTTTTTAGA TCTTGTTTTT
GAAGATATAG CTGTTTTAAA AGAATTGGAT TTTAAAGCTG ATATTTGGTA TTTAGATGGA
TTTTCTCCAA ATAAAAACTC GCAAATGTTT GATGGAAATT TAATCTTTGA AGTGGCAAGA
CTTTCTAAAA AAAATACACA AATTTGTACC TTTTCTTCGG CAAGTTTTTT ACAAAAAAAT
TTAAAAAAAT ATGGCTTTAG AGTAGAAAAA ACCAAAGGTT TTAGAAAAAG AGAAATGATT
AAAGCTTATT TGGAAAATGA GCTTGAGTTT AAAGACAAAG AAGCGTATTT TTCAAGAACA
TTTTCATCTT TAAAAAATAA AAAAGTAGCT ATTATTGGTG CGGGTATATC AAGCGCTGTT
TTAGCTTATG AGCTTAGTTT AAGAGGTTTT AAAATAGATG TTTTTGAAAA ACATTTAGAA
TTAGGCAAGG GTGCAAGTGG AAATGAAAGT GGAATTTTAA GCTCTTTAAT CTTAAAACCT
AAGGTAAATT TAGGGGAGTT TTCAGAGCTT TCTTTTATAG AAGCAAGCCG TTTTTATAGA
CAAATCTTAG ATTTAAAATT TAAGGGTGTG GTGGAGTTTG CACATAATGA TTTGATGCAA
GAAAGATTTG ACACACAAAG AGAAAATGTT TTGTTTAAAA TTTCAAAAAA TCAAGCTTTT
TTAGAAGAGG GTGGAGTGAT TTTTCCAAAA AATTTGGTTA AAAATCTTTT TGAAAAAAGT
AAAGCTTGTA TATATTTTAA TCATGAATTT CAAGCTTATA AATTTGAAAA TGAGTGTTTT
ACTTTAAAAT TTAAAAATGA TATTGTTAAA AGTGATTATG CGGTTTTGAT TTATGCTATG
GGTGCAGATA CAAAAGATTT TGTTTTTTAT GATGAGATGA AATTAAGCAA AGTAAGAGGT
CAAGTTACGC ATTTAAAACC TTTTTTAAAT ACTCCATTTC CTTTATCTTC TAAGGCTTAT
ATTTGCCCTG TAAAAGATGA TTTGCAAGTG ATTGGAGCAA GTTATGATAG GCTTGATACA
AGTTTAGAAT CAAAAGAAGA AGATGATAAA CAAAATATAG AAAATATAGC CGAATTTATA
GATAAAAATA CAAAATTAGA AATCATAGGT TCTAAGGTAG GCTTTAGATC TTATTCGAGT
GATCGCTTTA TGATAGTTGG AAATGCCTAT GATGAAGTGT TTTATAAAGA AGAATATAAA
GCTTTATTAT GGACAAAAAA CAAGGAGCAA AAGCTAGCTA AAATGTCTTG TAATTTGTAT
TTTAATTTTG CTCATGGATC AAGGGGTTTT AGCACAAGTG TTTTAGCGGC AAGGTATTTG
TGTGCATTGA TAAATAATGA ACCCTTGTGT TTAGAAAAAA AATACATCCA CGCTATTCAC
CCTGCAAGAT TTTTGATTCG CAAACTCAAA AAAGGCTTAT GA
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| Protein sequence | MKKAKLIFKD NTPFSLDFDD FYFNSKDGLN ESKFVYTHSF EWKNQENFII AESGFGIGLN
FFLTLKRFLQ TTPSKRPKKL FYISVEAFYI EKEQLREIYQ KLGFYEEFKE LLEQFLKFYP
KAKEGIYRFY FEDCFLDLVF EDIAVLKELD FKADIWYLDG FSPNKNSQMF DGNLIFEVAR
LSKKNTQICT FSSASFLQKN LKKYGFRVEK TKGFRKREMI KAYLENELEF KDKEAYFSRT
FSSLKNKKVA IIGAGISSAV LAYELSLRGF KIDVFEKHLE LGKGASGNES GILSSLILKP
KVNLGEFSEL SFIEASRFYR QILDLKFKGV VEFAHNDLMQ ERFDTQRENV LFKISKNQAF
LEEGGVIFPK NLVKNLFEKS KACIYFNHEF QAYKFENECF TLKFKNDIVK SDYAVLIYAM
GADTKDFVFY DEMKLSKVRG QVTHLKPFLN TPFPLSSKAY ICPVKDDLQV IGASYDRLDT
SLESKEEDDK QNIENIAEFI DKNTKLEIIG SKVGFRSYSS DRFMIVGNAY DEVFYKEEYK
ALLWTKNKEQ KLAKMSCNLY FNFAHGSRGF STSVLAARYL CALINNEPLC LEKKYIHAIH
PARFLIRKLK KGL
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