Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJJ81176_1110 |
Symbol | secF |
ID | 4682745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
Kingdom | Bacteria |
Replicon accession | NC_008787 |
Strand | - |
Start bp | 1027850 |
End bp | 1028821 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639853836 |
Product | preprotein translocase subunit SecF |
Protein accession | YP_001000770 |
Protein GI | 121613248 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0341] Preprotein translocase subunit SecF |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR00966] protein-export membrane protein SecF |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGTTTT TTAGCGAAAA GAAAATTTAT GATTTTATGA GAATGCGTTT TGCTGCTATT TCTCTTTCTT TTATTTTGTT TTTTGGTTCT ATTTATTTGC TTTGGGATAG GGGTTTGCAA TATGGCATTG ATTTTAGCGG GGGAACTTTA GTTCAGCTTA AATATGAAAA TGCAGCTCCT ATAACACAAA TCCGAGAAAT TTTAGAAAAA CAAGGAACTT TTCAAAATTT ATCTGTAACT GAATTTGGAA GCAATGAGGA AGTAACCATA CGCTTTTTAG GAAGTAATGA TAATGTAAGC AATGATATAG GTGAGCATAT AAGCACTCTT TTAAAGGATA CGGGAAAATT TGAAGTGCGT CGTGCTGATG TGGTAGGTCC AAAAGTAGGT GATGAACTTA GAAATAAGGG ACTTATGGCT ATAGCTGTAT CTTTGATAGC AATTTTAATT TATATAGCGT TGCGTTTTGA GTGGCGTTTT GCTCTCGCGG CTATAATCAG TGAAATTCAT GATGTTGTGA TTACTTTAGG GGCAATTTCT TTATTTAAAA TTGATGTCAA TCTAGATACT TTGGCTGCTG TTTTAACTGT GCTTGGGTAC TCTTTGAATG ATACAATTAT TATTTTTGAT AGAATCAGAG AAGGCATTAA AACAAGTAAA AAAACCGAAC TTGCACCTAT TATCAATGAA AGTGTTTCAG CAACTTTATC AAGAACGGTT TTAACTTCAG GGTTAACTTT AGCAACCGTT GTGATACTTT ATTTCTTTGG CGGGGAAATG ATACAAGGAT TTTCTTTGGC TTTAATTGTA GGTATTATAG CGGGAACTTT AAGCTCTATT TTTGTTGCAA GTCCGACATT ATTATGGTTT AAATTTAGTG TGCTTGAGTT TAGAAATAAA GAAATTGAAA AAGCAAAAAG AAAACAAGAT AAAGAACGCA ATCGTGCAAT GTATGAAAAA GGAACAGTGT AA
|
Protein sequence | MQFFSEKKIY DFMRMRFAAI SLSFILFFGS IYLLWDRGLQ YGIDFSGGTL VQLKYENAAP ITQIREILEK QGTFQNLSVT EFGSNEEVTI RFLGSNDNVS NDIGEHISTL LKDTGKFEVR RADVVGPKVG DELRNKGLMA IAVSLIAILI YIALRFEWRF ALAAIISEIH DVVITLGAIS LFKIDVNLDT LAAVLTVLGY SLNDTIIIFD RIREGIKTSK KTELAPIINE SVSATLSRTV LTSGLTLATV VILYFFGGEM IQGFSLALIV GIIAGTLSSI FVASPTLLWF KFSVLEFRNK EIEKAKRKQD KERNRAMYEK GTV
|
| |