| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_0709 |
|---|
| Symbol | ispG |
|---|
| ID | 4682458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008787 |
|---|
| Strand | + |
|---|
| Start bp | 635733 |
|---|
| End bp | 636806 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639853432 |
|---|
| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
|---|
| Protein accession | YP_001000382 |
|---|
| Protein GI | 121612967 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
|---|
| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTATA AAAGATTTAA AACCAGACAA ATCAAAGTAG GAAATGTTTT AATAGGCGGT
GATGCACCCA TTTCAGTTCA ATCTATGCTT TTTACTAAAA CAAGAGATAT AGAAGGTTCT
TTAGAACAAA TCAATCGTCT TTATTTTGCA GGAGCAAACA TAGTGCGTTT GGCGTGCTTG
GATATGGCTG ATGCAAGGGC TTTAAAAGAG ATTAAAGCTA AAAGTCCTCT ACCTTTAATC
GTAGATATTC ATTTTAATCA TAATTTGGCT GTATATTGTG CTGAATTTAT TGATGGCGTG
CGTATAAATC CTGGCAATAT AGGCTCTAAA GAAAATATCA AAGAAGTGGT AAAAGCATGT
AAAGAACGGG GTATCCCTAT ACGCATCGGT GTAAATCACG GCTCCATAGA AAAACAATTT
AGTGATAAAT TTGGCTATGG TGTCGATGCC ATGCTAGAAA GTGCGATGTA TAATATCAAG
CTTTTAGAGG ATTTAGACTT TTTTGATATT AAAATTTCCA TGAAGACTTC AGATGCTCAA
AAAACTATAG AAGCTTATGA GAGATTAAGA CCGCTTTGTG ATTATCCTTT TCACTTAGGG
GTAACTGAAG CAGGAACTAA ATTTCATAGC ACTGTAAAAA GTTCTATAGC TTTAGGAAAT
TTACTTCTTA AAGGTATAGG CGATACTATG CGTGTTTCTA TGACGGGTGA GCTTGAAGAA
GAAATTCGTG TAGCAAGAGC AATTTTGCAA GATAGCGGAG TACAAAAAAG CGGAGTAAAT
ATCATCTCAT GTCCAACTTG CGGTAGGATT CAAAGTGATT TGTTAAGTGC GATTAAAATC
GTAGAGGAAA AAACCAAGCA TATAAAAGAA CCTTTAAATA TCAGTGTCAT GGGTTGCGTG
GTAAATGCTT TAGGCGAAGC TAAGGGTGCT GATGTAGCTA TAGCCTTTGG AAAAAATCAA
GGACTTGTTA TAAGACATGG TGAAGTTGTA GCTAAATTAA AAGAAAGTGA ACTTGTAGAT
AGATTTTTAG CCGAAGTTGA AGATGAGGTT AAAAGTAGGG CTGTAAAAGA ATAA
|
|---|
| Protein sequence | MEYKRFKTRQ IKVGNVLIGG DAPISVQSML FTKTRDIEGS LEQINRLYFA GANIVRLACL
DMADARALKE IKAKSPLPLI VDIHFNHNLA VYCAEFIDGV RINPGNIGSK ENIKEVVKAC
KERGIPIRIG VNHGSIEKQF SDKFGYGVDA MLESAMYNIK LLEDLDFFDI KISMKTSDAQ
KTIEAYERLR PLCDYPFHLG VTEAGTKFHS TVKSSIALGN LLLKGIGDTM RVSMTGELEE
EIRVARAILQ DSGVQKSGVN IISCPTCGRI QSDLLSAIKI VEEKTKHIKE PLNISVMGCV
VNALGEAKGA DVAIAFGKNQ GLVIRHGEVV AKLKESELVD RFLAEVEDEV KSRAVKE
|
|---|
| |