| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CJJ81176_0636 |
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| Symbol | |
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| ID | 4683614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008787 |
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| Strand | + |
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| Start bp | 562535 |
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| End bp | 564460 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 639853359 |
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| Product | macrolide-specific efflux protein macB |
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| Protein accession | YP_001000309 |
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| Protein GI | 121613435 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00901082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTTTC TTAAAAATAT TTGCAAAAAT ATAGGTGAAA ATGCCATTTT AAAAAATGTA
AGTTTAAGTA TAGAAAAAGG TGAATTTGTT GCTATTATAG GACAAAGTGG AAGTGGTAAA
ACTTCACTTT TGAATATCAT AGGAACATTA GATACACCGA GTAGTGGAAC TTATGTTTTT
GATGAGTATG AAGTCACTAA ACTTAATAAC GATGAAAAAG CAAGATTAAG GCGTGAAAAA
ATAGGCTTTA TATTTCAAAG ATACAATCTT TTAAGCTTGC TGAGTGCTAA AGAAAATGTT
TCTTTACCTG CAGTTTATGC GGGAAAAAAA TTACAAGAAA GAAGTCAAAA CGCTAAAAAA
CTTTTAAATG ATTTAGAATT AGCTCATAAG TTAGATTCTA AACCAAACGA ATTAAGCGGA
GGGCAGCAAC AACGCGTTTC TATAGCAAGA GCTTTGATGA ATGGTGGAGA GCTTATTTTA
GCTGATGAGC CAACGGGGGC TTTGGATAGT AAAAGCGGCA TTATGGTGCT TGAAATTTTA
CAAAAACTTA ACGCACAAGG CCATACTATA GTCTTAGTAA CTCACGATCC AAAAATTGCA
GCACAGGCTA AAAGGGTTAT AGAGATTAAA GATGGGGAAA TTTTAAGCGA TACTAAAAAG
GAAAAAGCTC AAGAAAAACT CACTTTAAAA ACAATGTCTA AAGAGAAAAA AACACTTACT
TTGCTTAAAA ATCAAGCCTT TGAGTGTTTT AAGATAGCTT ATTCTTCCAT ACTTGCACAC
AAACTTCGTT CTATTTTAAC TATGCTTGGA ATCATCATAG GTATTGCTTC TGTAGTTTGT
GTTGTGGCTT TAGGATTGGG CTCCCAAGCT AAGGTGCTTG AGTCCATTGC AAGGCTTGGA
ACAAATACTA TTGAAATTCG TCCTGGAAGG GGTTTTGGAG ATTTGCGTTC AGGTAAAACA
AGGCTTAATT TTAGTGATTT AGAAACGCTA AGATCTTTAG AATATTTAGA AGCAGTTGAT
GCTCATTCAA ATACTTCAGG TGTGGCAACT TATACCAATA TTTCTTTAAG CGCAAGAGCT
GAAGGAGTGG GGGTAAATAA TTTTGCTATA GAAGGTTTAA GGATAGATGC GGGAAGAATT
TTAAATAATG ATGATGTAAA AAATAGTACC AATGTTGCTG TGTTGGATTT TAATGCTAAA
AAAAATCTTT TTCCTGATGA AAAAAGTGAA AATATTTTAG GTCGTGTGGT GCTTTTTAAT
TCTCAACCTT TTAAGATTAT AGGAGTTTTG CAAAAAGATA CAGACAAACC TATAGAAGAT
AATGTAGTGC GTCTTTATAT ACCCTATACA ACGCTGATGA ATAAGCTTAC AGGAGATAGA
AATTTGCGTG AAATCATAGT TAAGGTTAAA GATGATGTGA GTTCAACTTT GGCTGAAAAT
GCTATTATAA GAATTTTAGA AATTAAACGC GGACAAAAGG ATTTTTTTAC TTTTAATTCT
GACACCTTTA AGCAAGCTAT TACAGCAAAT AAACGCACTA CAACGATACT TACCGCTTGT
GTGGCTGTGA TTGCTTTGAT TGTTGGGGGT ATAGGAGTGA TGAATATCAT GCTTGTTTCT
GTAAGTGAAA GAACAAGAGA AATAGGCATA CGCATGGCTA TAGGGGCTAG AAGAGAAGAT
ATTATGATGC AGTTTTTAAT CGAAGCGGTT ATGATTTGTA CTATAGGGGC GATTTTAGGT
GTGATTTTAT CGATTTTTGT TATTTTTGCT TTTAATACTT TAAGTACTGA TTTTCCTATG
ATTTTAAATG CTTATTCTGT ACTTTTGGGA CTTTTAAGTT CTATGTTTAT CGGTGTGGTT
TTTGGTTTTT TCCCTGCAAG AAATGCAGCA AATTTAAATC CTATTAGTGC ATTATCAAAG
GAATGA
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| Protein sequence | MIFLKNICKN IGENAILKNV SLSIEKGEFV AIIGQSGSGK TSLLNIIGTL DTPSSGTYVF
DEYEVTKLNN DEKARLRREK IGFIFQRYNL LSLLSAKENV SLPAVYAGKK LQERSQNAKK
LLNDLELAHK LDSKPNELSG GQQQRVSIAR ALMNGGELIL ADEPTGALDS KSGIMVLEIL
QKLNAQGHTI VLVTHDPKIA AQAKRVIEIK DGEILSDTKK EKAQEKLTLK TMSKEKKTLT
LLKNQAFECF KIAYSSILAH KLRSILTMLG IIIGIASVVC VVALGLGSQA KVLESIARLG
TNTIEIRPGR GFGDLRSGKT RLNFSDLETL RSLEYLEAVD AHSNTSGVAT YTNISLSARA
EGVGVNNFAI EGLRIDAGRI LNNDDVKNST NVAVLDFNAK KNLFPDEKSE NILGRVVLFN
SQPFKIIGVL QKDTDKPIED NVVRLYIPYT TLMNKLTGDR NLREIIVKVK DDVSSTLAEN
AIIRILEIKR GQKDFFTFNS DTFKQAITAN KRTTTILTAC VAVIALIVGG IGVMNIMLVS
VSERTREIGI RMAIGARRED IMMQFLIEAV MICTIGAILG VILSIFVIFA FNTLSTDFPM
ILNAYSVLLG LLSSMFIGVV FGFFPARNAA NLNPISALSK E
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