Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CJJ81176_0635 |
Symbol | |
ID | 4682833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter jejuni subsp. jejuni 81-176 |
Kingdom | Bacteria |
Replicon accession | NC_008787 |
Strand | + |
Start bp | 561363 |
End bp | 562535 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 639853358 |
Product | macrolide-specific efflux protein macA |
Protein accession | YP_001000308 |
Protein GI | 121612494 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0167041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA AGGTTATTTT AATCGTTTTA ATTGCAATAC TTGGAAGTGT TGGAGCTTAT TTTATTTTTT TTAATAATGA TGAAAAAATC AGCTATTTAA CTCAAAAAAT ACAAAAAAAA GATATATCTC AAACCATAGA GGCAGTAGGA AAGGTATATG CCAAAGATCA AGTCGATGTG GGTGCTCAAG TTAGCGGACA AATTATAAAA CTTTATGTGG ATGTGGGAAC TCATGTAAAG CAAGGTGATT TGATCGCTCA AATTGACAAA GATAAACAAC AAAACGATTT AGATATTACA AAAGCTCAGC TTGAAAGCGC TAAGGCTAAT TTAGAGAGTA AAAAAGTTGC TCTTGAGATT GCGAGTAAGC AGTATCAAAG AGAGCAAAAA CTTTATGCAG CTAAAGCAAG TTCTCTTGAA AATTTAGAAA CTCAAAAAAA TAATTATTAT ACTTTAAAAG CTAATGTTGC AGAGCTTAAT GCTCAAGTAG TTCAACTTGA AATCACTCTT AAAAATGCAC AAAAAGATTT AGGTTATACA ACCATTACTG CTCCTATGGA TGGTGTTGTG ATTAATGTAG CTGTAGATGA AGGACAAACA GTTAATGCTA ATCAAAATAC TCCTACTATA GTCCGTATAG CTAATTTAGA CGAAATGGAA GTAAGAATGG AAATAGCAGA GGCTGATGTG AGTAAGATAA AAGTAGGAAC AGAGCTTGAT TTTTCTTTGC TTAATGATCC TCAAAAAACT TATCATGCTA AGATTGCAAG TATAGATCCA GCTGATACTG AAGTGAGTGA TTCTAGTACA AGCTCAAGCT CATCAAGTTC GAGTTCTTCA AGCTCAAGCT CATCAAATGC TATTTATTAT TACGCAAAAT TTTATGTACC TAATAAAGAT GATTTTTTGC GTATTGGTAT GAGTATACAA AATGAAATTG TCGTAGCAAG TGCAAAGGCT GTTTTAGCAG TGCCAACTTA TGCAATTAAA AGTGATCCAA AAGGCTATTA TGTTGAAATT TTGGAAAATC AAAAAGCTGT TAAAAAATAT GTCAAACTTG GCATTAAAGA TTCTATCAAT ACTCAAATTT TAGAAGGTGT AAATGAAAAT GAAGAATTGA TAGTAAGCTC AAGTGCTGAT GGTTTAGCTC CTAAAATGAA GTTGAGATTT TAA
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Protein sequence | MKKKVILIVL IAILGSVGAY FIFFNNDEKI SYLTQKIQKK DISQTIEAVG KVYAKDQVDV GAQVSGQIIK LYVDVGTHVK QGDLIAQIDK DKQQNDLDIT KAQLESAKAN LESKKVALEI ASKQYQREQK LYAAKASSLE NLETQKNNYY TLKANVAELN AQVVQLEITL KNAQKDLGYT TITAPMDGVV INVAVDEGQT VNANQNTPTI VRIANLDEME VRMEIAEADV SKIKVGTELD FSLLNDPQKT YHAKIASIDP ADTEVSDSST SSSSSSSSSS SSSSSNAIYY YAKFYVPNKD DFLRIGMSIQ NEIVVASAKA VLAVPTYAIK SDPKGYYVEI LENQKAVKKY VKLGIKDSIN TQILEGVNEN EELIVSSSAD GLAPKMKLRF
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